DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dom and ep400

DIOPT Version :10

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:XP_012824741.2 Gene:ep400 / 779577 XenbaseID:XB-GENE-6258767 Length:3058 Species:Xenopus tropicalis


Alignment Length:3540 Identity:1040/3540 - (29%)
Similarity:1511/3540 - (42%) Gaps:904/3540 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AGGGHEGLSPAP---PAVPD------------------RVT-PHSTEISV-APANSTSTTVRA-- 46
            ||.....|:|.|   ||.|.                  :|| |.|.::.. :|....:..::|  
 Frog    85 AGNQQITLTPLPIPNPASPGFQFSSQPRRFEHGSPSYIQVTSPMSQQVQTQSPTQPNAMPIQALQ 149

  Fly    47 ---AGSVGAAL-----PATRHHQHIATQVKGIASSSSK-------------QQKQLASAQLPVPL 90
               .|:.||:|     ..||.....:..|:.|:.|.|.             |..|.|:||:.:|.
 Frog   150 SVRTGTAGASLGMCSQSPTRGFVDASVLVRQISLSPSNGGHFVFQEGTGIAQIAQGATAQVQLPA 214

  Fly    91 SP---------LPQQQQQTAEA------TAAAAAPAHSNVSVSSSTIEASVLPPQ---------- 130
            ..         |.|...||...      .:..|:.|:.....:.|.|..:.||||          
 Frog   215 GAAQATMHERRLSQPHSQTGGTIHHLGPQSPVASGANMQTLTTPSHITTTNLPPQISSIIQGQLI 279

  Fly   131 AKRQRLDDNE-------DRTSAASIVGPAESS-NIVSSLLPASVASSSEVGGLSS---------- 177
            .::|.|...:       ||||...|.|...:| .:.|...|.|.:.::...|||:          
 Frog   280 QQQQVLHGQQLGRAISFDRTSGGMIAGVTGASFGMTSPPTPTSPSRAAGPQGLSNLPLTTTVSTT 344

  Fly   178 ------------TALQDLNALKKRILQQKLQILRNLKERHLENVSEYFYLQN-GGSMMDYPAWRK 229
                        .|.|:...::|:.|....:.::.|||...|.:.|.|:||: .|:|||:.|::|
 Frog   345 HKKQCKKLEEIPPATQEEARMRKQCLDHHQKNMKVLKENFKEYLIELFFLQHFQGNMMDFLAFKK 409

  Fly   230 KTPTPQFISYSNANRID----------QLIHED--------------------KPSTSAAAAAAQ 264
            | ||.....|...|.:|          ::|:::                    .|...:||.::|
 Frog   410 K-PTLGLQGYLRQNDLDLEEEEEEEQSEVINDEVKIVTGKDGQTGTPVAIATQLPPNVSAAFSSQ 473

  Fly   265 NQKYTTQQTDSVESSLVSGIGT-----------------------------------GATKGAPL 294
            .|.:  ||| ...|..|....|                                   |.|.|.||
 Frog   474 QQPF--QQT-LTGSGAVGAANTIDIEAFKRQQVLTQTDPSKRPRLDVPRHGMVFQHPGVTSGVPL 535

  Fly   295 -------DGNI--SNSTV-----KTNTQSQVPSKIGSFTESTPAATESNSSTTVPGTATSGAATS 345
                   .|.:  :..||     |.|.|...||| |...::  ||:.......:||...:.....
 Frog   536 QQLMPTAQGGMPPTPQTVQLTGQKQNQQQYDPSK-GPPVQN--AASLHTPPPQLPGRVQASNIPI 597

  Fly   346 TSATSA----------------EASGNVLAVEAEIKIPAVGATPVAISTKLPAAVVQLTQQGHIP 394
            :|..:|                :...|...::.:|:        |.:.::.|...:..:.|..:|
 Frog   598 SSLPTALHLAQQQQQQQQQQQQQQQINETQIQPQIQ--------VQVKSQPPNVQISASPQSQLP 654

  Fly   395 ---GRPL-GGRHGMVFGQIPAPPAAVGNPSVPLVPGGTPLLPCNTSAGSTALRRPQGQNNASSGS 455
               .:|| .|.|..:  |.....||:...:|.||..||. .|.....|:|       |.||....
 Frog   655 LQISQPLQPGFHTQM--QTSQQQAAIQQQTVTLVRPGTD-SPQQRLTGNT-------QTNAFVAP 709

  Fly   456 AAASGGGGSLTPTPLYTGNGP--------------AALGGSGGLTPGTPTSGSLLSPALGGGSGT 506
            ||.|      |.:|:.:.:.|              :...||.| |.||...|.|..|: |..|..
 Frog   710 AAIS------TASPIASFSLPTNRALPATNKSMSVSKAPGSAG-TVGTKIQGQLQIPS-GLTSEN 766

  Fly   507 PNSAAQEFSFKAKQEVYVMQRISELQREGLWTERRLPKLQEPSRPKAHWDYLLEEMVWLAADFAQ 571
            |.....|   :.|.|.:|.|||:||::||||:.|||||:|||||.|:|||||||||.|:||||||
 Frog   767 PQDKLAE---QVKLENHVHQRIAELRKEGLWSLRRLPKIQEPSRAKSHWDYLLEEMQWMAADFAQ 828

  Fly   572 ERKWKKNAAKKCAKMVQKYFQDKATAAQRAEKAQELQLKRVASFIAREVKSFWSNVEKLVEYKHQ 636
            ||.||:.:|||..:...:|..:|....:||:|.:|.:|||:|:.||||::.||||:|::||.|.|
 Frog   829 ERMWKQASAKKLVRKAARYHDEKKMHFERAKKEEENKLKRIAASIAREIEYFWSNIEQVVEIKLQ 893

  Fly   637 TKIEEKRKQALDQHLSFIVDQTEKFSQQLVEGMNKSVADTPSLNSSRLTSPKRESDDDFRPESGS 701
            .:.:|||::||                              :||:..:..|              
 Frog   894 MEFQEKRRKAL------------------------------NLNTESMKGP-------------- 914

  Fly   702 EDDEETIAKAEEDAADVKEEVTALAKESEMDFDDFLNDLPPGYLENRDKLMKEEQSSAIKTETPD 766
                   .||.|:|. ||.:....:..|.                      |.:.||:.      
 Frog   915 -------LKAIEEAC-VKRDTNKASPTSR----------------------KRKASSSW------ 943

  Fly   767 DSDDSEFEAKEASDDDENTISKQEEAEQEIDHKKEIDELEADNDLSVEQLLAKYKSEQPPSPKRR 831
             ||.       |.:|:|.||::||..|..|||..|:.||..:.||.::.|:.:|:.....:....
 Frog   944 -SDG-------AVEDEEETIAEQESKEGNIDHHAELCELAREADLPLDDLVKQYEGAYDQNFHWP 1000

  Fly   832 KLAPRDPELDSDDDSTAVDSTEESEDAATEDEEDLSTVKTDTDMEEQDEQEDGLKSLMADADATS 896
            :..|:               :|||.:|..|.:|  :||:: .|.::.....|.|  |.||....:
 Frog  1001 QTLPQ---------------SEESNNAKNESDE--ATVES-ADYQKPTVLIDFL--LCADQYRMA 1045

  Fly   897 GAAGSGSTAGASGNKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWLV 961
            ..|.||........:|  :.|.|..||.|.|.||...::.....:|.||..|||:||.:|||||.
 Frog  1046 DVASSGHLGSRKHTRD--IGDVARAAELLLPNGNARITSTEKKKLPCLLHGSLRDYQQVGLDWLE 1108

  Fly   962 TMNERKLNGILADEMGLGKTIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKI 1026
            ...::.||||||||.||||.:|.|||:||||.::||||||||||.|..:|.||:|||:||||.|:
 Frog  1109 KQYKKNLNGILADETGLGKNVQVIALMAHLASSEGNWGPHLIVVRSCKILKWELEFKRWCPGLKV 1173

  Fly  1027 LTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQ 1091
            |.|:|.|:|.:.||..|.:||:|:|||||||.:.:..|:|.:|:||||:|||...|||...:.|.
 Frog  1174 LLYFGKQRELRKKRQKWDEPNSFNVCITSYKHLFKSHQAFMKKRWKYLVLDEVHQIKNMTEKHWD 1238

  Fly  1092 LLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETL 1156
            .:.|..:..||||..|||.|...:.|:::|||:|.:...:.||      |:....|.|.|....|
 Frog  1239 AVFNLPSHNRLLLRDTPLMNTWRDHWTMVHFLIPGLSQPYLEF------PLKISTEENQENCHKL 1297

  Fly  1157 ITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSV 1221
            ...||:.:|||:|||.||:||||:.||||||:.|||||||:.||||.:.:..|::.|:.|:.:||
 Frog  1298 FITLHRTVRPFILRRSKKDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQDALKGGHFVSV 1362

  Fly  1222 INVLMQLRKVCNHPNMFEARPTISPFQMDGITFHTPRLVCDIMEYDPFTQINLETLNLLLLHLEQ 1286
            ::|||||:::||||::.:.||..|.|..:.:.:.|..|:..::|.||:...::...:  |..||.
 Frog  1363 LHVLMQLQRICNHPDLVDPRPEHSSFVCETLQYRTASLILQVLEKDPWKITDMSLFD--LFGLED 1425

  Fly  1287 TMTAYVSHKSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAVKVGAS-- 1349
            .:|.|...........||.:|:|..:|..||| |.     .::::.:.|.|.::......|.:  
 Frog  1426 KITRYEVQTLPGQKVTRKQMEEIYASPESAPR-PT-----PVKIKPSRLFQPVQYGQKPEGRTVT 1484

  Fly  1350 ----PAMRL--------------------------EGSKIMPMRNLLPSGRVLKRVSASINPVNM 1384
                ||.|:                          :|..::.:..|..||....|::....||.:
 Frog  1485 FSNVPASRMVTTTTATVTQQGQARGRSPVTTASCNQGGDVVKIAQLAASGGTQGRIAQPKTPVTL 1549

  Fly  1385 ALKPVVINSVVTTTSS---STTASSPTGALSVLSNSKLLGARSQI-NAPTPAKVAKTMQDGKPFF 1445
            ..:    .:..|.:.|   ..||..|.         :|.|:..|| :||           |:|  
 Frog  1550 QFQ----GNTFTLSQSQLRQLTAGQPL---------QLQGSVLQIVSAP-----------GQP-- 1588

  Fly  1446 YLTPATNSGAAGARLTLTSKTTASASTTTSRTTVTASTTSGQQLIRDPIVKDLATHVKSTVQKQS 1510
            ||.|      .|..:..|        ...|.....|....|.||   |......|..:|.:..::
 Frog  1589 YLRP------PGQMIMQT--------VPQSGAIQNAINALGNQL---PAGMSCVTSAQSGIPGRT 1636

  Fly  1511 I-ANGKTEPEEETEAEDPY-KVQELIQMRKEQRLAALKRMAMINRRRTDATPIYGEDCREAIQ-R 1572
            : .:|..:|....::...: ..||..:.::......|.|:...|.|.....|:||.|...... .
 Frog  1637 LMPHGCGDPGAALKSSSSFTPAQEFAEEKQRLMRECLDRLFSSNERNCGRAPVYGADLLSICSLN 1701

  Fly  1573 CMQATRSLKRSTWQTRGYANCCTAMAHRNGWS--LNHLLKSFEERCAD-LKPVFAN--FVIYVPS 1632
            ...|..|:..|.|...|.|||..:....:..|  |.||:.|   .|.| ....|.|  .:..|||
 Frog  1702 AAGAEPSISGSQWGWAGSANCLRSSNLLDDTSDPLRHLILS---PCQDKATQEFLNKRTLCVVPS 1763

  Fly  1633 V-CAPRIRRYVQNLSSTH----WQHEQRIENIVDQALRPKLA-LLHPIISEMT---TKFPDPRLI 1688
            | .||.:      |:..|    :.|..   |::...|:.::| .||.::.:.:   .:|||.|||
 Frog  1764 VIAAPPV------LTMPHPPPRYTHSM---NLLRDGLKEQVAPHLHHLLRQTSPHCMQFPDLRLI 1819

  Fly  1689 QYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1753
            |:|.|||..:..|||:|:..|.|||||:||..|||:||.||::|...:||:|.....:|...||:
 Frog  1820 QWDSGKLDALAVLLRKLRSEGRRVLIFSQMLLMLDILELFLDFHALTFLRIDEFANYDQCYDLMK 1884

  Fly  1754 RFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVS 1818
            .||.|.||||.::||.|..:|:....|:|.||||||.||.||::||..|.|||:|:|||||||||
 Frog  1885 SFNQDPRIFCLLISTHSHSLGVPYVEANTAIFYDSDLNPVMDSRAQAWCERIGRTKDVHIYRLVS 1949

  Fly  1819 ERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQSEQDESSQEKSENKDRIVA 1883
            ..:||..:||... |.::.::|.:|.:|:..:....||.:||.:.....|....||:|.      
 Frog  1950 ANSIEEKLLKNGT-KDLIREVAAQGNDFSMAFLTQQTIHELFELYSPLDDTGFGEKAEE------ 2007

  Fly  1884 TTTLSDTPSTVVETEKQSLRAFEHALAAAED--EQDVQATK-TAKAEVAADLAEFDENIPIATED 1945
            ...||..||.......:..:.|..||.:.|:  ||:.:..| .||...|.|..            
 Frog  2008 FIMLSQEPSQTETIATKFAKPFIEALKSIENGAEQEEEFLKGDAKKNFAVDSC------------ 2060

  Fly  1946 PNAEGGPQVELSKADLEMQNLVKQLSPIERYAMRFVEE------TGAAWTAEQLRAAEAELEAQK 2004
                 ...:|.|:. :|:..:|:||:|||:||:.::||      .|.|...|||::.       |
 Frog  2061 -----CHSIEASEL-MELAAVVEQLTPIEKYALNYLEEFYTSSAKGKAEIIEQLKST-------K 2112

  Fly  2005 REWEANRLAAMHKEEELLKQETEAEEMLTYSRKDSSNQVWI---SRNTMEQMPMWCPPTPPQDND 2066
            .:||...|......|:.:..|...|::|||:|:|:.|:.:|   .....|.||:|.||||||| :
 Frog  2113 TKWEVQNLKETKDWEDEMVLEESGEDLLTYTREDAYNKEFIYDSPDGQTEIMPIWTPPTPPQD-E 2176

  Fly  2067 NDIYIDYSLSFMYELEPIAETDLPPVYVRKEHKRSRTDAGYDGSRRPNKMRREDNYVPPRSLFDR 2131
            ||||||..:..||:..||.|:.|||||||||.||.:||.|..|  |..|.|..::.|||||||||
 Frog  2177 NDIYIDSVMCLMYDSNPIPESKLPPVYVRKERKRHKTDPGAAG--RKKKQRHGESVVPPRSLFDR 2239

  Fly  2132 PTPQLARLRRELKSQRFRGSFKPNMPIPGLKPQLPT--KPLTE--PEAMAEWCVFEDMAILHVLV 2192
            .||.:.::|||.|.|:.....|.....  .|| |||  ||.||  |: ..||.:.||.|:|..:.
 Frog  2240 ATPGMLKVRREGKEQKKNILLKQQTQF--AKP-LPTLVKPATESGPD-NPEWLISEDWALLQAVK 2300

  Fly  2193 NLQGLPCSLMLLSPGQTPNWDLVSEMVNFCSKTYRSARQCRWRYETHIQPREEGKVVESPKKQKK 2257
            :|..||.:|.::||..||||||||::||.||:.|||::|||.|||..|.||||||::.....:||
 Frog  2301 HLLELPLNLTVVSPAHTPNWDLVSDVVNSCSRIYRSSKQCRSRYENVIIPREEGKLMFEANPKKK 2365

  Fly  2258 LKPTLRTEYLKSPLRYLRTTQLYVSDNNASFYKTMRSRFDSIKTAYLKKAPPPKRQFSA-PSLMN 2321
            .|...:|:    ..|.|||:|:|..|...:..:...:||:.:|....|::||.|..... |...|
 Frog  2366 TKSIYKTK----NSRPLRTSQIYAQDEGVTHTQLYTNRFELMKMTAGKRSPPIKPLLGMNPFQKN 2426

  Fly  2322 PKHMEVLQEFGILNYDQPVSPQNIAAMKANKIREKQRG----QQMSQPPVGVGVVQQMQQQSQQQ 2382
            |||..||.|.|| |||:|:.|..:|:::|.:|.::::.    ...:|...|....||.||..||.
 Frog  2427 PKHASVLAESGI-NYDKPLPPIQVASLRAERIAKEKKALVEQHHRAQQQTGSQTAQQPQQNGQQV 2490

  Fly  2383 QQPAPPPLPQQQQPQQVVQQVQQQQQQQQQQQQQQVVQQQLPTVSNVQQTLPVQQTVELVQQQPT 2447
            ..|...  |.|.||||||              .|||:||..|.|......:|.  |..|.....|
 Frog  2491 SSPVVQ--PAQAQPQQVV--------------PQQVIQQSQPVVPTATSAVPA--TAVLAGAIKT 2537

  Fly  2448 TTTTVAVPAAGGQLQQLQIQHLTSSNVSPGQQTAILLHQPQQQLRTHPGQGGQSNTQQLVKTIVG 2512
            ..|..::.||.           .|.||                               :|.|:.|
 Frog  2538 AVTGASIQAAA-----------VSGNV-------------------------------IVNTVAG 2560

  Fly  2513 TSSSLTAGQLQQLAQQSAVASGGQSSVSVVLTTPVQTLPSVVQPQ------IGSGAQIVSISSQ- 2570
            ..|:......::||  |.|..|       .||.|..: |.||..|      ..:.|::|:|::. 
 Frog  2561 VPSATFQPINKRLA--SPVIPG-------TLTAPSGS-PQVVHTQQRAAAAAAAPAEMVTIATNQ 2615

  Fly  2571 ----TLPVNSSPQLGSIV-------QTQSLPQVVSVSTLPTVGTVLTTTANQP-------QQQHQ 2617
                ..||..    |::|       |||:.|.|..|:|..|.|..|.:.:..|       |||..
 Frog  2616 GVRAVTPVTG----GAVVCSSITPAQTQTRPIVTQVTTATTAGVQLASKSITPAQLQMLRQQQAA 2676

  Fly  2618 TTAVTTLNT-TMLRGQ-RIVSTAAGNTL-----------QQRTTAGGQSIVSMPNLGQGASPSQF 2669
            ...|..:.. |...|| :.|...:...|           ||.|.|..|...|.|     |:|.|.
 Frog  2677 QVQVPQIQAQTQSPGQIKAVGKISQEQLLKLQKQKMQLPQQTTQATAQQSQSAP-----AAPVQG 2736

  Fly  2670 QTQLRLAAVPTSPATQTTQLVTTKGIPVSALQQGGKTTVIPVTQQSGGAHIQLYRQRSLKVLQTT 2734
            |.|.:    .|....||.||..     |||.:.|...|...|      |::|:.|   |...|..
 Frog  2737 QQQPQ----QTQAQQQTQQLAA-----VSAPRAGAVLTGATV------ANLQVAR---LLQAQGQ 2783

  Fly  2735 TQAVPSGSAGATGATANLVQAGGTIIQASNMATHVTSQKVAVSGMP---GTSTTVQAGNVVSSVQ 2796
            .||.|       |.||.:..|...::.|...:..||:..|.|:|:.   |.:.....|..|.:..
 Frog  2784 IQAQP-------GQTAQVTLAKPPVVSAVVSSAGVTTLPVTVAGISVAIGQNQKAAGGQAVVAQP 2841

  Fly  2797 MHGQARTQFIKQMAAGKQQLQRQVVSADGTTTTTAAGDMLLVKRHNILAAQKAQQASGALFTTTT 2861
            ::       ::|:...|||.|:.:.|       .||.....|::..|.|.|.|.|.         
 Frog  2842 LN-------VQQLLKLKQQQQKALQS-------QAATGQAAVQQPKITAPQVAVQT--------- 2883

  Fly  2862 GQQQQQQQQQGQLPVAGQPQQVTQHQIASLVKASTAAAASGSSVNAGGVTVSATNPTVQAGSVNM 2926
             |||||.|||||     |.||...:.....:|....||                 |..||     
 Frog  2884 -QQQQQPQQQGQ-----QQQQKMTYTAQPAIKTQFLAA-----------------PINQA----- 2920

  Fly  2927 TLPQLKPGSQIKVTMPNQMRHLQMQQQLTMPRKISRMTQLVSASGQPTATNIITTTGPQQQQQGV 2991
               |..||:|            |:|.|:    :::::.|:|                  |||..|
 Frog  2921 ---QKSPGAQ------------QVQGQI----QVAKLPQVV------------------QQQAAV 2948

  Fly  2992 TVSGGGTLPTVASQQQQQQHQQKVGGGNSVQAQLLHIQNTKGLSNSVTMQQIQQVMRSGQQGTLA 3056
            |.:....:|.:....||.|.|                        :||:.|              
 Frog  2949 TQAAVANIPQMVPSSQQVQPQ------------------------TVTLSQ-------------- 2975

  Fly  3057 TTNLVLGKTSVGRVIPVSVASQANQRQTIQVVSAASAQALAAGNLRTHVAGPSIASTLKVAAPGS 3121
                               |:.|.|:|.:||:.|                             ||
 Frog  2976 -------------------ATAAGQQQQVQVLPA-----------------------------GS 2992

  Fly  3122 AGGQTTQQTLIAALQHNQRQNASPVRLQTTAGGNLLAVVQQQQQQQHTSIAGPTAGPAEVMTITQ 3186
            |..|..||.::                              |||||..|.||.....|   ::.|
 Frog  2993 AAAQVVQQKMV------------------------------QQQQQVVSSAGAQQIQA---SVNQ 3024

  Fly  3187 TTTTLPTVGSLQQQQQQQQQQGGISQPTTQ 3216
            :||  |.:|:...|.||.:.|  :..||.:
 Frog  3025 STT--PALGANDTQAQQAKLQ--VRTPTVR 3050

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727 40/70 (57%)
HepA 692..>1235 CDD:440319 208/542 (38%)
DEXQc_SRCAP 949..1171 CDD:350761 110/221 (50%)
SF2_C_SNF 1685..1817 CDD:350180 70/131 (53%)
DISARM_DrmD_b <1702..>1936 CDD:468472 95/236 (40%)
HEC1 <1858..>2031 CDD:444066 46/181 (25%)
SP1-4_N 2486..>2819 CDD:425404 92/373 (25%)
ep400XP_012824741.2 EP400_N 1..501 CDD:434938 93/419 (22%)
Atrophin-1 <505..>753 CDD:460830 57/275 (21%)
HSA 800..871 CDD:214727 40/70 (57%)
PLN03142 944..>1378 CDD:215601 200/468 (43%)
DEAD-like_helicase_N 1096..1312 CDD:475120 110/221 (50%)
SF2_C_SNF 1823..1948 CDD:350180 65/124 (52%)

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