DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dom and ep400

DIOPT Version :10

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:XP_009302476.1 Gene:ep400 / 562355 ZFINID:ZDB-GENE-081104-186 Length:3109 Species:Danio rerio


Alignment Length:3594 Identity:969/3594 - (26%)
Similarity:1449/3594 - (40%) Gaps:1114/3594 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNEGNSAGGGH------EGL--------SPAPP-AVPDR--VTPHSTEISVAPANSTSTTVRAAG 48
            :|..:..|.||      .||        ||..| ||.:|  ..|||     .|.:||.       
Zfish   197 INLSSPPGSGHFVYQDGAGLATGTVHLTSPGTPGAVRERRLSQPHS-----QPGSSTV------- 249

  Fly    49 SVGAALPATRHHQHIATQVKGIASSSSKQQKQLASAQLPVPLSPLPQQQQQTAEATAAAAAPAHS 113
                      ||:.:.:||..:.|..            |:..:.||.|                 
Zfish   250 ----------HHKALPSQVPTLGSPG------------PITTTNLPPQ----------------- 275

  Fly   114 NVSVSSSTIEASVLPPQAKRQRLDDNEDRTSAASIVGPAESS----NIVSSLLPASVASSSEVGG 174
                .||.|:..:..|..        .::|| .|:||.|.|:    .:.|::.|:|.:.|:...|
Zfish   276 ----ISSIIQGQLARPTM--------FEKTS-QSVVGVANSAAATFGVPSTIPPSSPSRSNSSQG 327

  Fly   175 LSSTAL--------------------QDLNALKKRILQQKLQILRNLKERHLENVSEYFYLQN-G 218
            |||.:|                    .::..|:|:.|:...:.:..|||...|.:.|.|:||: .
Zfish   328 LSSQSLTPTSMKKMQPKKLEEIAPSNPEVAQLRKQCLEHHGKKMEGLKEVFKEYLIELFFLQHLQ 392

  Fly   219 GSMMDYPAWRKKTPTPQFISYSNANRIDQLIHEDKPSTSAAAAAAQNQKYTTQQTDSVESSLVSG 283
            |:||||.|::||...|.| :|...|.:|....|::...|                          
Zfish   393 GNMMDYIAFKKKPCVPLF-TYLRQNDLDLEDEEEEEEQS-------------------------- 430

  Fly   284 IGTGATKGAPLDGNISNSTVKTNTQSQVPSKIGSFTESTPAATESNSSTTVPGTATSGAATST-- 346
                         .:.|..||.     |..|.|...  ||.|.    :|.:|...::..:|..  
Zfish   431 -------------EVINDEVKV-----VTGKDGQTV--TPVAI----ATQLPPNVSAAFSTQQQF 471

  Fly   347 SATSAEASGNVLAVEAEIKIPAVGATPVAIST-KLPAAVVQLTQQGHIPGRPLGGRHGMVFGQIP 410
            ...:..|||::             :.||.:.. |...|:.|..|...  .|...|||||:| |.|
Zfish   472 QTHAGVASGSI-------------SNPVDMEAFKRQQAMAQADQAKR--SRMEVGRHGMIF-QHP 520

  Fly   411 APPAAVGNPSVPL------VPGGTPLLPCNTSAGSTALRRPQGQNNASSGSAAASGGGGSL-TPT 468
            | ...:|:|.|||      ..||.|..|.....|..  ::.|.|.:.|.|....:  ..|| ||.
Zfish   521 A-VTPLGSPGVPLQQLMPTAQGGMPPTPQTVQIGGQ--KQNQQQYDPSKGPPVQN--AASLHTPP 580

  Fly   469 PLYTGNGPAA----------------------------LGGSGG--------------------- 484
            |...|..|.|                            :.|:|.                     
Zfish   581 PQLPGRLPQAGLPLSLAQGQAMVVDQQATVTGGQLQVKVQGAGAVLAPVNPHAQLQAQLQQMQSG 645

  Fly   485 -------------------------LTPG------------------------------------ 488
                                     |.||                                    
Zfish   646 LHLQMQQQQQMQQSVMQPGQATVTLLRPGAETSQAAQRLMSNSLSSPVISSVPLTSPSSLPSPLT 710

  Fly   489 -----TPTSGSLLSP------------------ALGG---GSGTPNSAAQEFSFKAKQEVYVMQR 527
                 ||.:|..|||                  :||.   |..:..|:..:.:.:||.|.:|.||
Zfish   711 SAPVRTPNTGPSLSPVAQSKLTATNGTVGLKLSSLGQSSIGQNSQESSQDKQAEQAKLESHVHQR 775

  Fly   528 ISELQREGLWTERRLPKLQEPSRPKAHWDYLLEEMVWLAADFAQERKWKKNAAKKCAKMVQKYFQ 592
            |:||::||.|:..|||||||..|||:.||||||||.|:||||||||:||..||||..:...:|..
Zfish   776 IAELRKEGQWSASRLPKLQESCRPKSQWDYLLEEMQWMAADFAQERRWKMAAAKKLVRTCARYHV 840

  Fly   593 DKATAAQRAEKAQELQLKRVASFIAREVKSFWSNVEKLVEYKHQTKIEEKRKQALDQHLSFIVDQ 657
            :|....:|.:|.:|::|:.:||.|||.|..||||:|::||.||..:|.:|:|:.|....:....|
Zfish   841 EKKKMGEREKKEEEMRLRHIASTIARGVDYFWSNIEQIVEIKHHFEIYDKQKKVLCLQKASSKGQ 905

  Fly   658 TEKFSQQLVEGMNKSVADTPSLNSSRLTSPKRESDDDFRPESGS------EDDEETIAKAE--ED 714
            ..|..|            :....|.|.|.|.|:     |..|.|      ||:|.||.:.|  |.
Zfish   906 CAKSGQ------------SSDKESKRETGPSRK-----RKSSTSLSDVEVEDEESTIEEQEATEA 953

  Fly   715 AADVKEEVTALAKESEMDFDDFLNDLPPGYLENRDKLMKEEQSSAIKTETPDDSDDSEFEAKEAS 779
            |||.|.|:..|.||:|:..||.:......|.|.              .|.|..|..||       
Zfish   954 AADQKAELAELTKEAEVPLDDLVKQYAGAYAEG--------------FEWPQPSSQSE------- 997

  Fly   780 DDDENTISKQEEAEQEIDHKKEIDELEADNDLSVEQLLAKYKSEQPPSPKRRKLAPRDPELDSDD 844
            |:|      :||||                |::.                         .|||..
Zfish   998 DED------REEAE----------------DMNT-------------------------PLDSPH 1015

  Fly   845 DSTAVDSTEESEDAATEDEEDLSTVKTDTDMEEQDEQEDGLKSLMADADATSGAAGSGSTAGASG 909
            |:..:||                                     :...|...||  ..:|:|..|
Zfish  1016 DAVLIDS-------------------------------------LLSMDQYRGA--ERTTSGPDG 1041

  Fly   910 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWLVTMNERKLNGILAD 974
            .....:.:.||..:.:.|||:..::....:..|.||..||||||.:|::||.:::.:.|||||||
Zfish  1042 KPTKDIAEVAAATDLILPKGSARTTLTSRSSPPSLLHGSLREYQQVGVEWLASLHRKNLNGILAD 1106

  Fly   975 EMGLGKTIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLK 1039
            |.|||||:||:|..|||||.:|.|||||:||.:..:||||||||:||||.|||.|.||:::|:.|
Zfish  1107 ETGLGKTVQTVAYFAHLACNQGIWGPHLVVVRTCKLLNWEMEFKRWCPGLKILLYLGSRRQRRYK 1171

  Fly  1040 RVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLL 1104
            |..|.:||.||||:|||||:::||..|.|::||:|:|||.|.|||...:.|:.:.|..:::|:||
Zfish  1172 RSRWCEPNNFHVCVTSYKLLLKDQSHFLRRRWKHLVLDEVQLIKNMTEKHWETIFNIKSQQRILL 1236

  Fly  1105 TGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFLL 1169
            ..|||||.|.|||:::|||:|.:...:..|      |:....:.|.:|...|:.|||::|:||:|
Zfish  1237 INTPLQNTLKELWTMIHFLLPGITHPYLNF------PIKPGTDQNQDYCHKLVIRLHRMIQPFIL 1295

  Fly  1170 RRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQLRKVCNH 1234
            ||.|::|||||||||||::.||||.||:.:|||.:.:...:|.|:||:.:.|:.|||||:|:|||
Zfish  1296 RRSKRDVEKQMPKKYEHILKCRLSKRQKSMYEDILIQPSAQEALKTGHFVRVLEVLMQLQKICNH 1360

  Fly  1235 PNMFEARPTISPFQMDGITFHTPRLVCDIMEYDPFTQINLETLNLLLLHLEQTMTAYVSH----K 1295
            |::.:.|.|.:.:....:.::||.|:.:.::.|.:..::|...:  |::.|..:|.|.:.    |
Zfish  1361 PDLIQPRDTHNSYVCQPLQYNTPSLLLNALQQDQWKTVDLSLFD--LINNEGKLTRYEAEEALPK 1423

  Fly  1296 SRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAVKVGASPAMRLEGSKIM 1360
            .|:   .::|||:|..|                                   ..|..|....||.
Zfish  1424 IRM---TKQLIEEIYNA-----------------------------------RDPPARPRPCKIK 1450

  Fly  1361 PMRNLL-------PSGRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTA-------------S 1405
            |||..|       |.||::...|::    ..|.:...:.:..|||::|.||             :
Zfish  1451 PMRLFLPVQYGTKPEGRLVPMTSST----TQAPRTTTVTTAPTTTTNSVTAVSNTQPRGKSPLTT 1511

  Fly  1406 SPTGALSVLSNSK---LLGARSQINAPTPAKVAKTMQDGKPFFYLTPATNSGA----------AG 1457
            :|:...|:::.|.   |.||     .|.|..:..:|  |.|.....||....|          ..
Zfish  1512 TPSAQASIINCSSGPLLTGA-----IPNPPSIPLSM--GVPGVTTMPAVTPQAPSPVPLQPSLVS 1569

  Fly  1458 ARLTLTSKTTASAST-------------------------------TTSRTTVTASTTS------ 1485
            .||.|:|:..|...:                               |.|::.:...||.      
Zfish  1570 QRLVLSSQAQARLPSGDVVKVAQLVGQSRIAQPETPVTLQFQGNKFTLSQSQLRQLTTGQPLQLQ 1634

  Fly  1486 -------------GQQLIR---DPIVKDLATHV-------------------KSTVQKQSIANGK 1515
                         ||.|:|   .|:|.......                   .:|:...::....
Zfish  1635 GTLGNILQIVSAPGQPLLRPQGPPMVMPTVPQAVPAQNSSGTPPPATSTPPQANTMASTTVTPAN 1699

  Fly  1516 TEPEEETEAEDPYKVQELIQMRKEQRLAALKRMAMINRRRTDATPIYGED----CREAIQRCMQA 1576
            |:.|...:..:....||..:.|..|....|..:...|.||:..:.:||.|    |.....|...|
Zfish  1700 TDMETNAKHSNNSTSQESSEERNRQLKERLSSLFHANERRSSRSVLYGSDLVKTCSVYEGRPPPA 1764

  Fly  1577 TRSLKRSTWQ-------TRGYANCCTAMAHRNGWSLNHLLKSFEERCADLKPVFANFVIYVPSVC 1634
            ..:.:.|.|.       .|....|.:.:|     ||...:.|..|:.|....:...|...:|:..
Zfish  1765 FPAPQHSRWSWVGRDSCIRAQQTCVSTVA-----SLRSAILSNTEQEAAASTLLKRFSWILPAAV 1824

  Fly  1635 APRIRRYVQNLSSTHWQHEQRIENIVDQALRPKLALLHPIISEMTTKFPDPRLIQYDCGKLQTMD 1699
            ||..:.|..|...::...::.....:.:|..|..|.:..:.......|||..:::.|.|||:.:.
Zfish  1825 APPPQLYACNPPPSYSLAQKSFRRQLQEASAPFNAEIRKLACPPVASFPDAHMLEMDSGKLEALS 1889

  Fly  1700 RLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCF 1764
            .||::|.....||||||||..|||:||:||::....|:|||.|..:|:||..::::|.:::|||.
Zfish  1890 ILLQKLSAENRRVLIFTQMASMLDILESFLDHRHLTYVRLDESLSLEERQEQVKKYNRNRQIFCT 1954

  Fly  1765 ILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKK 1829
            ||:.|......::..|||::|||:|.||:||.:.|:.|.:||:::|:|||||.|..:||..:||.
Zfish  1955 ILTNRCCSAMGHVFDADTIVFYDTDLNPSMDMRTQEWCDKIGRSKDIHIYRLESGNSIEEKLLKN 2019

  Fly  1830 ANQKRMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQSEQDESS------QEKSENKDRIVATTTLS 1888
            .. |.::.::|.:|.::|..:....||:|||.:|....::..      ||.|.::          
Zfish  2020 GT-KDLIREVAAQGMDYTLAFLTQRTIQDLFEVEAGSGEKVEEFVVLHQEPSPSE---------- 2073

  Fly  1889 DTPSTVVETEKQSLRAFEHALAAAEDEQDVQATKTAKA--EVAADLAEFDENIPIATEDPNAEGG 1951
            ..|..|.....|:|..........|:|..|:..:..|:  |.|....|.|           .|.|
Zfish  2074 SIPPHVARPYIQALNTIRQETQYEEEEGQVEVDEDVKSDKEKAGGPVEMD-----------IEEG 2127

  Fly  1952 PQVELSKADLEMQNLVKQLSPIERYAMRFVEETGAAWTAEQLRAAEAELEAQKREWE--ANRLAA 2014
            .:.|.|:.: |:..:::||:||||||:.::|   ....:|..:..:..:|..||.||  ..:...
Zfish  2128 AREETSQLE-ELAAVMEQLTPIERYALHYLE---YLHISEDEQVVKERMETTKRGWELQLQQKLK 2188

  Fly  2015 MHKEEELLKQETEAEEMLTYSRKDSSNQVWISRN---TMEQMPMWCPPTPPQDNDNDIYIDYSLS 2076
            :.|||::: ||.| |::|:|:|:|:.|..::..|   ..|.||:|.||||||| |||||||..:.
Zfish  2189 VEKEEQMI-QEDE-EDLLSYTREDAYNMEYVFENEDGQTEIMPLWTPPTPPQD-DNDIYIDSVIC 2250

  Fly  2077 FMYELEPIAETDLPPVYVRKEHKRSRTDAGYDGSRRPNKMRREDNYVPPRSLFDRPTPQLARLRR 2141
            .||:..|:.|:.|||||||||.||....:...   |..|....::.:|||||||:.:  |.::||
Zfish  2251 LMYDTAPMPESKLPPVYVRKERKRHMDPSALG---RKKKKGHGESVIPPRSLFDKAS--LLKVRR 2310

  Fly  2142 ELKSQRFRGSFKPNMPIPGLKPQLPTKPLTEPEAMAEWCVFEDMAILHVLVNLQGLPCSLMLLSP 2206
            ::|.|:...|.|...|.....|.|....:...:...||.:.||.|:|..:..|..||.:|.::||
Zfish  2311 DVKDQKKNFSLKQQAPFAKPLPSLLKPAMESGQDNPEWLISEDWALLQAVKQLLELPLNLTIVSP 2375

  Fly  2207 GQTPNWDLVSEMVNFCSKTYRSARQCRWRYETHIQPREEGKVV--ESPKKQKKLKPTLRTEYLKS 2269
            ..||||||||::||.||:.|||.:|||:|||..|.||||||::  .:|||.|     .::.|...
Zfish  2376 AHTPNWDLVSDVVNSCSRIYRSPKQCRYRYENVIIPREEGKLIYDANPKKNK-----TKSIYKSK 2435

  Fly  2270 PLRYLRTTQLYVSDNNASFYKTMRSRFDSIKTAYLKKAPPPKRQFSA-PSLMNPKHMEVLQEFGI 2333
            ..|.|||.|:|..|:||:..:...:||:.:|....|::||.|..... |...||||..||.|.||
Zfish  2436 NSRPLRTCQIYTQDDNATQIQLYSNRFELMKIIASKRSPPIKPLLGMNPFQKNPKHASVLAESGI 2500

  Fly  2334 LNYDQPVSPQNIAAMKANKIREKQRGQQMSQPPVGVGVVQQMQQQSQQQQQPAPPPLPQQQQPQQ 2398
             :||:|:.|..:|:.:|.:| .|::.|.:::.       |:.||.:|||||..     ...|||.
Zfish  2501 -SYDKPLPPIQVASQRAERI-AKEKKQALAEQ-------QRAQQLAQQQQQTT-----GAAQPQG 2551

  Fly  2399 VVQQVQQQQQQQQQQQQQQVVQQQLPTVSNVQQTLPVQQTVELVQQQPTTTTTVAVPAAGGQLQQ 2463
            ...|.|.|.|                                             .||||.|   
Zfish  2552 AAAQPQAQTQ---------------------------------------------TPAAGAQ--- 2568

  Fly  2464 LQIQHLTSSNVSPGQQTAILLHQPQQQLRTHPGQGGQSNTQQLVKTIVGTSSSLTAGQLQQLAQQ 2528
                    :|..|         ||.|     ||....:||                         
Zfish  2569 --------ANAVP---------QPSQ-----PGAAAVANT------------------------- 2586

  Fly  2529 SAVASGGQSSVSVVLTTPVQTLPSVVQPQIGSGAQIVSISSQTLPVNSSPQLGSIVQTQSLPQVV 2593
                        .|||..::|..:                            |:.:|        
Zfish  2587 ------------AVLTGALKTAAA----------------------------GTSIQ-------- 2603

  Fly  2594 SVSTLPTVGTVLTTTANQPQQQHQTTAVTTLNTTMLRGQRIVSTAAGNTLQQRTTAGGQSIVSMP 2658
                 |..|||                         .|..||:|.|                   
Zfish  2604 -----PAAGTV-------------------------SGNVIVNTVA------------------- 2619

  Fly  2659 NLGQGASPSQFQTQLRLA------AVPTSPATQTTQLVTTKGIPVSALQQGGKTTVIPVTQQSGG 2717
                |..|.|||...|||      |:|.: .|.|.|:|.|:|                       
Zfish  2620 ----GVPPGQFQANKRLASPVIPGALPAT-GTATAQVVHTRG----------------------- 2656

  Fly  2718 AHIQLYRQRSLKVLQTTTQAVPSGSAGATGATANLVQAGGTIIQASNMATHVTSQKV-AVSGMPG 2781
                               |||:.:|.|                  .:....|||.| ||     
Zfish  2657 -------------------AVPAAAAPA------------------EVVAIATSQSVRAV----- 2679

  Fly  2782 TSTTVQAGNVVSSVQMHGQARTQFIKQMAAGKQQLQRQVVSADGTTTTTAAGDMLLVKRHNILAA 2846
              |.|.|..|||:....||::|:.:...|...|..|.:.::           ..||.::      
Zfish  2680 --TPVTASAVVSTNLTSGQSQTRTLVATAPAVQLSQNKQIT-----------QQLLFRQ------ 2725

  Fly  2847 QKAQQASGALFTTTTGQQQQQQQQQ-----GQLPVAGQPQ---------QVTQHQIASLVKASTA 2897
            |:.||           |||||||||     .|:...|:||         |:.|.|:|:.|.|:..
Zfish  2726 QQLQQ-----------QQQQQQQQQPQATSPQIKAVGKPQQELLKQKKLQMAQQQVAAAVAAAQG 2779

  Fly  2898 AAASGS----SVNAGGVTVSAT-NPTV------QAGSV--NMTLPQLKPGSQIKVTMPNQMRHLQ 2949
            ..|..:    .|:|   |.:|| ||.:      :||:|  ..|:..|:.....:|..|..::   
Zfish  2780 QQAPSTQQPQQVHA---TPAATANPQIATVAAPRAGAVLAGTTVTNLQVARLTRVPAPGSIQ--- 2838

  Fly  2950 MQQQLTMPRKISRMTQLVSASGQPTATNIITTTGPQQQQQGVTVSGGGTLP-TVASQQQQQQHQQ 3013
                              :..||| |...:|...|......|..||..||| |:|..........
Zfish  2839 ------------------AQPGQP-AQVTLTKPPPVVSVPAVVSSGVTTLPVTMAGISVAIGQAP 2884

  Fly  3014 KVGGGNSVQAQLLHIQNTKGLSNSVTMQQIQQVMRSGQQGTLATTNLVLGKTSVGRVIPVSVASQ 3078
            |.||              ..:::...:||:||::...:|..:|..              .:|...
Zfish  2885 KTGG--------------PMVTHPFQVQQVQQLLHRQKQQAVAQA--------------AAVQKA 2921

  Fly  3079 ANQRQTIQVVSAASAQALAAGNLRTHVAGPSIASTLKVAAPGSAGGQTTQQTLIAALQHNQRQNA 3143
            |..:||...|...:||..|....:.:...|        ..||     ...|....::...|:..|
Zfish  2922 AQPQQTQAAVQQKAAQTPAQQQQKVYTTAP--------LQPG-----IKTQFFTTSITQPQKTAA 2973

  Fly  3144 SPVRLQTTAGGNLLAVVQQQQQQQHTSIAGPTAGPAEVMTITQTTTTLPTVGSLQQQQQQQQQQG 3208
            || ::|.|   .:..:||||      .::.|....|:..|:. .|...|..||:|.|.|.|....
Zfish  2974 SP-QIQVT---KIPQIVQQQ------IVSSPQQIQAQPQTVA-LTQAAPAAGSVQAQAQVQVIPA 3027

  Fly  3209 GISQPTTQQVRKLVQKKIL 3227
            |.:|...|   ||:|::::
Zfish  3028 GTAQVVQQ---KLLQQQVV 3043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727 37/70 (53%)
HepA 692..>1235 CDD:440319 206/550 (37%)
DEXQc_SRCAP 949..1171 CDD:350761 114/221 (52%)
SF2_C_SNF 1685..1817 CDD:350180 57/131 (44%)
DISARM_DrmD_b <1702..>1936 CDD:468472 82/241 (34%)
HEC1 <1858..>2031 CDD:444066 46/182 (25%)
SP1-4_N 2486..>2819 CDD:425404 61/339 (18%)
ep400XP_009302476.1 EP400_N 1..493 CDD:434938 90/423 (21%)
PABP-1234 <511..628 CDD:130689 33/122 (27%)
HSA 791..>839 CDD:214727 31/47 (66%)
DEAD-like_helicase_N 1081..1297 CDD:475120 114/221 (52%)
SF2_C_SNF 1882..2006 CDD:350180 55/123 (45%)
SANT 2352..>2412 CDD:473887 32/59 (54%)
PRK07764 <2999..>3109 CDD:236090 16/49 (33%)

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