DRSC/TRiP Functional Genomics Resources

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Protein Alignment dom and Hel89B

DIOPT Version :10

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster


Alignment Length:1947 Identity:377/1947 - (19%)
Similarity:582/1947 - (29%) Gaps:857/1947 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 AHSNVSVSSSTIEASVLPPQAKRQRLDDN-------EDRTSAASIVGPAESSNI---VSSLLPAS 165
            |..:||...||       .:.:..|:.|.       :...|....:|.:|::.:   .::.:.|.
  Fly   698 AGGDVSTPGST-------SRKRTPRIGDELGGNILAQSNASLKLYLGGSEATPLDVRDANFMRAR 755

  Fly   166 VASSSEVGGLSSTALQD---------------------LNALKKRILQQKL-------------Q 196
            ::||..:|.||...:|.                     |..|......|::             :
  Fly   756 ISSSRALGALSHYLVQPAPGVVYTPQTESPTDCYTKVLLGHLNAHSAVQRIVCGLIIAFWALEDE 820

  Fly   197 ILR----NLKERHLENVSEYFY-----------LQNGGSMMDYPAWRKKTPTPQFISYSNANRID 246
            .:|    ||:|:..:.||||.|           ||..   .|:.|..|:...| ...::||..: 
  Fly   821 PVRPGPPNLQEKLHQCVSEYVYYDEVAISLTRLLQEA---QDFIATLKQNKIP-INDFNNAKIL- 880

  Fly   247 QLIHEDKPSTSAAAAAAQNQKYTTQQTDSVESSLVSGIGTGATKGAPLDGNISNSTVKTNTQSQV 311
                                  |..|.::|.::|...:     :..||.                
  Fly   881 ----------------------TLDQIEAVATTLSENL-----RSYPLK---------------- 902

  Fly   312 PSKIGSFTESTPAATESNSSTTVPGTATSGAATSTSATSAEASGNVLAVEA--EIKIPAVGATPV 374
            |..:....|...:...|...||     :..:|...||.:|.| |.:.|:..  :...|.|.....
  Fly   903 PKVLDMLEERRRSLQASYQQTT-----SEQSAYHVSAQAALA-GAICALHCLPDKLNPVVKPLME 961

  Fly   375 AISTKLPAAVVQLTQQGHIPGRPLGGRHGM--VFGQIPAPPAAVGNPSVPLV---PGGTP--LLP 432
            :|..:....:.||:.:..:        |.|  |..:.|:|.:.:.|....|:   |..||  ::|
  Fly   962 SIKREQCLQLQQLSAEFLV--------HLMDQVCDRNPSPNSKILNNLCTLLRSDPEFTPKLVMP 1018

  Fly   433 CNT-----------------SAGSTALRRPQGQNNASSGSAAASGGGGSLTPTPLYTGNGPAALG 480
            ..|                 ...:.||::.....|..||:      ||:.|||......|     
  Fly  1019 LETLKQTPVSSEVINNCVYYGILTLALQQTVTTTNTRSGA------GGATTPTATTAPRG----- 1072

  Fly   481 GSGGLTPGTPTSGSLLSPALGGGSGTPNSAAQEFSFKAKQEVYVMQRISELQREGLWTERRLPKL 545
                  ||.|.:|.:||         ..:|......||:|.                        
  Fly  1073 ------PGRPPTGEILS---------ATNATAHIELKAQQA------------------------ 1098

  Fly   546 QEPSRPKAHWDYLLEEMVWLAADFAQERKWKKNAAKKCAKMVQKYFQDKATAAQRAEKAQELQLK 610
                                          |:..||:|             ..||...|  ..::
  Fly  1099 ------------------------------KEAEAKQC-------------RIQRLGAA--CAIE 1118

  Fly   611 RVASFIAREVKSFWSNVEKLVEYKHQT--KIEEKRKQALDQHLSFIVDQTEKFSQQLVEGMNKSV 673
            ::......::      :||:..::|..  |:|:..|:|.|..|..::... ....:||..|....
  Fly  1119 KLCRIFGEQI------IEKVAVFQHLMFGKVEQFVKEAYDWRLGSLLPDL-GVCNELVSSMQLIE 1176

  Fly   674 ADTPSLNSSRLTSPKRESDDDFRPESG----------SEDDEETIA-KAEEDAADVKEEVTALAK 727
            ...|.|:.:  ..|:..:   ..|..|          .......|| .||.||....:.|     
  Fly  1177 TAAPHLHVA--LHPQMFA---LLPSLGFIVCHPLKAVRHMAARCIAVLAEIDACQTMQFV----- 1231

  Fly   728 ESEMDFDDFLNDLPPGYLENRDKLMKEEQSSAIKTETPDDSDDSEFEAKEASDDDENTISKQEEA 792
                     ::||.|       .|.|.||.               .|.:.|.:..|..:|:.:  
  Fly  1232 ---------VHDLLP-------LLGKIEQL---------------IERQGAIEAIERVVSRLQ-- 1263

  Fly   793 EQEIDHKKEIDELEADNDLSVEQLLAKYKSEQPPSPKRRKLAPRDPELDSDDDSTAVDSTEESED 857
                  .|.:..:.    |.|..||.               |..||     |:|..:.||.    
  Fly  1264 ------IKVVPYIV----LLVVPLLG---------------AMSDP-----DESVRLLSTH---- 1294

  Fly   858 AATEDEEDLSTVKTDTDMEEQDEQEDGLKSLMADADATSGAAGSGSTAGASGNKDDMLNDAAALA 922
                      .......:...|.:.:.|||....|..|                    .|...|.
  Fly  1295 ----------CFANLVQLMPLDGKTEQLKSDPLQARKT--------------------RDREFLD 1329

  Fly   923 ESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIAL 987
            ....||    |..|...|||..::  ||.||..|::||..:|:..|:|||.|:||||||:|||.:
  Fly  1330 YLFNPK----SIPNYKVPVPISVE--LRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICI 1388

  Fly   988 LA--HLACAKGNWG--PHLIVVPSSVMLNWEMEFKKWCPGFKILT---YYGSQKER-KLKRVGWT 1044
            ||  |:.....|..  |.|::.|.::..:|..|.:|:.....:|.   |||....| ||:....|
  Fly  1389 LAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGT 1453

  Fly  1045 KPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPL 1109
            |.|   :.:.||..|.:|...|....:.|.:|||...|||.|::..:.:.......||:|:|||:
  Fly  1454 KCN---LVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPI 1515

  Fly  1110 QNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNE-----TLITRLHKVIRPFLL 1169
            ||:::|||||..||||....:.::|.:.||.|:....:......|     ..:..||:.:.||||
  Fly  1516 QNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLL 1580

  Fly  1170 RRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSR----------AKTRETLQTGNLLS---V 1221
            ||:|::|.|.:|.|....:.|.||..|..|||||.::          ..:..::.|.||.:   :
  Fly  1581 RRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHI 1645

  Fly  1222 INVLMQLRKVCNHPNMFEARPTISPFQMDGITFHTPRLVCDIMEYDPFTQINLETLNLLLLHLEQ 1286
            ...|..|:.|||||.                                           |:|...:
  Fly  1646 FQALRYLQNVCNHPK-------------------------------------------LVLRQSE 1667

  Fly  1287 TMTAYVSHKSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAVKVGASPA 1351
            .:|...|                                        :||               
  Fly  1668 ELTKVTS----------------------------------------QLA--------------- 1677

  Fly  1352 MRLEGSKIMPMRNLLPSGRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTASSPTGALSVLSN 1416
                                                                          |||
  Fly  1678 --------------------------------------------------------------LSN 1680

  Fly  1417 SKLLGARSQINAPTPAKVAKTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTTTSRTTVTA 1481
            |.|                                                              
  Fly  1681 SSL-------------------------------------------------------------- 1683

  Fly  1482 STTSGQQLIRDPIVKDLATHVKSTVQKQSIANGKTEPEEETEAEDPYKVQELIQMRKEQRLAALK 1546
                                                       :|         :....:|.|||
  Fly  1684 -------------------------------------------DD---------IEHSAKLPALK 1696

  Fly  1547 RMAMINRRRTDATPIYGEDCREAIQRCMQATRSLKRSTWQTRGYANCCTAMAHRNGWSLNHLLKS 1611
            ::.:                                                             
  Fly  1697 QLLL------------------------------------------------------------- 1700

  Fly  1612 FEERCADLKPVFANFVIYVPSVCAPRIRRYVQNLSSTHWQHEQRIENIVDQALRPKLALLHPIIS 1676
                                                                             
  Fly  1701 ----------------------------------------------------------------- 1700

  Fly  1677 EMTTKFPDPRLIQYDCG-KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHI----Y 1736
                          ||| .:||.       .|:.||.|||.|:..|||::|..| ...|:    |
  Fly  1701 --------------DCGIGVQTE-------SVSQHRALIFCQLKAMLDIVEQDL-LRRHLPSVTY 1743

  Fly  1737 LRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDR 1801
            ||||||....|||.::..||.|..|...:|:|..||:|:||||||||||.:.||||..|.||.||
  Fly  1744 LRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDR 1808

  Fly  1802 CHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQSE 1866
            .|||||.:.|::|||::..::|..|:.....|.:.::..:...|.:.....:|.|.|||...:.:
  Fly  1809 AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASLQTMGTSQIFDLFNGGKDK 1873

  Fly  1867 QDESSQEKSENKDRIVATTTLSDTPSTVVET--EKQSLRAFEHALAAAEDEQD----VQATK 1922
            ..||      ....:..|.:...:.:|::|.  |..|    ||..   |:|.|    |||.|
  Fly  1874 GAES------GSSAVQGTASGGMSMNTIIENLPELWS----EHQY---EEEYDLGNFVQALK 1922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727 7/70 (10%)
HepA 692..>1235 CDD:440319 154/579 (27%)
DEXQc_SRCAP 949..1171 CDD:350761 83/234 (35%)
SF2_C_SNF 1685..1817 CDD:350180 64/136 (47%)
DISARM_DrmD_b <1702..>1936 CDD:468472 85/231 (37%)
HEC1 <1858..>2031 CDD:444066 19/71 (27%)
SP1-4_N 2486..>2819 CDD:425404
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447 102/609 (17%)
HepA <1342..1849 CDD:440319 196/933 (21%)
Blue background indicates that the domain is not in the aligned region.

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