DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dom and CG10445

DIOPT Version :9

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:NP_001246974.1 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster


Alignment Length:1308 Identity:229/1308 - (17%)
Similarity:412/1308 - (31%) Gaps:507/1308 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   698 ESGSEDDEETIAKAEEDAADVKEEVTALAKESEMDFDDFLNDLPPGYLENRDKLMKEEQSSAIKT 762
            ||.|..|...|.|   .:..::::.:....:|..:.::::...|...||...:....|.:..:..
  Fly     2 ESSSPSDTTEIHK---QSCSIQDQSSVPVPDSSGEINNWMEPEPVDSLELSGEYADNESAIFVSA 63

  Fly   763 ETPDDSDDSEFEAKEASDDD--ENTISKQEEAEQEIDHKKEIDELEADNDLSVEQLLAKYKSEQP 825
                    ||:..|:|..|.  :..::.:::..|..::..|..|| .|..|.:|:|.|:.::...
  Fly    64 --------SEYNEKKAQIDQLVQKILTMEQQQRQLEENASETKEL-CDLKLHLEKLNARLEALGE 119

  Fly   826 PSPKRRKLAPRDPELDSDDDSTAVDSTEESEDAATEDEEDLSTVKTDTDMEEQDEQEDGLKSLMA 890
            .....| |.....|:..:|:|..||.||:                     .:......||.....
  Fly   120 FLDTLR-LREDQQEIKIEDNSELVDHTEQ---------------------PKWSNLYSGLNRYRQ 162

  Fly   891 DADATSGAAGSGSTAGASGNKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHI 955
            .|:.|:        |....:|.::::....|.|.:||:    .:.:.:...|.||...|.::|..
  Fly   163 KANHTA--------AQFYQHKSNIIDSLKTLYEPIQPR----PAIDDLEKQPALLLVRLLKHQQS 215

  Fly   956 GLDWLVTMNERKLN-GILADEMGLGKTIQTIALL------------------------------- 988
            .|.|:.....:|:: |||||:||||||:..|||:                               
  Fly   216 CLKWMQFRERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKKKALTLKWTQEFNRVYC 280

  Fly   989 ----------------------------------------------------------------- 988
                                                                             
  Fly   281 KEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLA 345

  Fly   989 --------------AHLACAKGNWGPHLIVVPSSVMLNW--EMEFKKWCPGFKILTYYGSQKERK 1037
                          .||:..:......|:|.|.|||..|  |:..|......::||::|..:.  
  Fly   346 KTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRH-- 408

  Fly  1038 LKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKK------WKYLILDEAQNIKNFKSQRWQLLLNF 1096
              .:|.....::.:.||||.|||.:.:.:....      |..:|||||..|:|.|:.....:...
  Fly   409 --EIGIEAFRSYDLVITSYNLVVNELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQL 471

  Fly  1097 STERRLLLTGTPLQNDLMELWSLMHFL-MPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLI--T 1158
            .......|||||:||..:::::|:.|: :|    :.::.::|..|           .||:::  .
  Fly   472 RAHCHWALTGTPVQNRGVDVFALLRFVNVP----NFQDLQQWKKN-----------LNESMLGHR 521

  Fly  1159 RLHKVIRPFLLRRLKKEVEKQ-----MPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNL 1218
            ||:.:|:|.:|||.|::::..     :|.....:|..:||..:..:|:                :
  Fly   522 RLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQ----------------I 570

  Fly  1219 LSVINVLMQLRKVCNHPNMFEARPTISPFQMDGITFHTPRLVCDIMEYDPFTQINLE----TLNL 1279
            ||.|:     :|:                                     |||..|:    ..:|
  Fly   571 LSAIS-----KKI-------------------------------------FTQFLLQREKGNSDL 593

  Fly  1280 LLLHLEQTMTAYVSHKSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAV 1344
            ....||:|......|.|                        :.:|.        |:.:|.   ..
  Fly   594 NYYSLERTPQFIAGHMS------------------------DERYN--------EIYERF---LK 623

  Fly  1345 KVGASPAMRLEGSKIMPMRNLLPSGRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTASSPTG 1409
            .:|.:|..::.|..|:.:                                               
  Fly   624 SLGYNPGEKILGIYILVL----------------------------------------------- 641

  Fly  1410 ALSVLSNSKLLGARSQINAPTPAKVAKTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTTT 1474
                     ||..|.                    |...|....|.....||         :...
  Fly   642 ---------LLRLRQ--------------------FCCHPGLMIGMLRGALT---------AEDV 668

  Fly  1475 SRTTVTASTTSGQQLIRDPIVKDLATHVKSTVQKQSIANGK---TEPEEETEAEDPYKVQELIQM 1536
            ....|.||...||          |...|.:.:.|....:.:   .:.|:.|..:..:|::.:...
  Fly   669 QNVKVDASDVEGQ----------LKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDE 723

  Fly  1537 RKEQRLAALKRMAMINRRRTDATPIYGEDCREA--IQRCMQATRSLKRSTWQTRGYANCCTAMAH 1599
            .||:.:.            .|:    |:|...|  .:..:.:.|:||.                 
  Fly   724 IKEENVP------------WDS----GDDLPTASSFEDQLDSARALKL----------------- 755

  Fly  1600 RNGWSLNHLLKSFEERCADLKPVFANFVIYVPSVCAPRIRRYVQNLSSTHWQHEQRIENIVDQAL 1664
                               |.|                                   :|.:.|.:
  Fly   756 -------------------LNP-----------------------------------QNPIFQFI 766

  Fly  1665 RPKLALLHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFL 1729
            ||...|                        ...:|:|...|.....::::.:|....|.::...|
  Fly   767 RPSAKL------------------------KMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRL 807

  Fly  1730 NYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTM 1794
            .......|..:|....::|:|::..||.:......:||..:||||:||..|:.::..|..|||.:
  Fly   808 QDLSWETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQL 872

  Fly  1795 DAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAI--EGGNFTTTY---FKSS 1854
            :.|||||.:|.|||:...|||.:.:.|:|..|....:.|..::.:.:  |||..|...   ...:
  Fly   873 ERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGLNLA 937

  Fly  1855 TIKDLFTM 1862
            .:|.||.|
  Fly   938 ELKKLFEM 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727
ASF1_hist_chap <674..831 CDD:304562 25/134 (19%)
FAM176 <824..>868 CDD:291517 9/43 (21%)
SNF2_N 952..1238 CDD:278600 80/412 (19%)
DEXDc 969..1108 CDD:238005 48/257 (19%)
Helicase_C 1692..1806 CDD:278689 31/113 (27%)
CG10445NP_001246974.1 HepA <90..945 CDD:223627 211/1207 (17%)
DEAD-like_helicase_N 209..534 CDD:421690 69/343 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467128
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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