Sequence 1: | NP_001286676.1 | Gene: | dom / 45655 | FlyBaseID: | FBgn0020306 | Length: | 3233 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
Alignment Length: | 2205 | Identity: | 419/2205 - (19%) |
---|---|---|---|
Similarity: | 668/2205 - (30%) | Gaps: | 1011/2205 - (45%) |
- Green bases have known domain annotations that are detailed below.
Fly 531 LQREGLWTERRLPKLQEPSRPKAHWDYLLEEMVWLAADFAQERKWKKNAAKKCAKMVQKYFQDKA 595
Fly 596 TAAQRAEKAQELQLKRVASFIAREVKSFWSNVEKLVEYKHQTKIEEKRKQALDQHLSFIVDQTEK 660
Fly 661 FSQQLVEGMNKS----VADTPSLNSSRLTSPKRESDDDFRPESG-SEDDE----ETIAKAEEDAA 716
Fly 717 DVKE-EVTALAKESEMDFDDFLNDLPPGYLENRDKLMK--EEQSSAIKTETPDDSDDSEFE---- 774
Fly 775 -----------------------------------------------AKEASDDDE--------- 783
Fly 784 ------------------------NTI----------------SKQEE------AEQEID----- 797
Fly 798 ------------------------HKKEIDELEAD--NDLSVEQLLAKYKSEQPP--------SP 828
Fly 829 KRRKLAPRDPE---LDSDDDSTAVD-------------------STEESEDAAT-------EDEE 864
Fly 865 DLSTVKTDTDMEEQDEQEDGLKSLM-----ADADATSGAAGSGSTAGASGNK------DDMLNDA 918
Fly 919 AALAESLQPKGNTLSSTNVVTPVPFLLKHS---LREYQHIGLDWLVTMNERKLNGILADEMGLGK 980
Fly 981 TIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKER--------- 1036
Fly 1037 ---------KLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQL 1092
Fly 1093 LLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLI 1157
Fly 1158 TRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQT---GNLL 1219
Fly 1220 SVINVLMQLRKVCNHPNMFEARPTISPFQMDGITFHTPRLVCDIMEYDPFTQINLETLNLLLLHL 1284
Fly 1285 EQTMTAYVSHKSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAVKVGAS 1349
Fly 1350 PAMRLEGSKIMPMRNLLPSGRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTASSPTGALSVL 1414
Fly 1415 SNSKLLGARSQINAPTPAKVAKTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTTTSRTTV 1479
Fly 1480 TASTTSGQQLIRDPIVKDLATHVKSTVQKQSIANGKTEPEEETEAEDPYKVQELIQMRKEQRLAA 1544
Fly 1545 LKRMAMINRRRTDATPIYGEDCREAIQRCMQATRSLKRSTWQTRGYANCCTAMAHRNGWSLNHLL 1609
Fly 1610 KSFEERCADLKPVFANFVIYVPSVCAPRIRRYVQNLSSTHWQHEQRIENIVDQALRPKLALLHPI 1674
Fly 1675 ISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRL 1739
Fly 1740 DGSTRVEQRQILMERFNG-DKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCH 1803
Fly 1804 RIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAI------EGGNFTTTYFKSSTIKDL--F 1860
Fly 1861 TMEQSEQDESSQEKSENKDRIVATTTLSDTPSTVVETEKQS-----LRAFEHALAAAEDEQDVQA 1920
Fly 1921 TKTAKAEVAADLAEFDENIPIATEDPNAEGGPQVELSKADLEMQNLVKQLSPIERYAMRFVEETG 1985
Fly 1986 AAWTAEQLRAAEAELEAQKREWEANRLAAMHKEEELLKQ--ETEAEEMLTYSRKDSSNQVWISRN 2048
Fly 2049 TMEQMPMWCPPTPPQDNDNDIYIDYSLSFMYELEPIAETDLPPVYVRKEHKRSRTDAGYD----- 2108
Fly 2109 -GSRRPNKMR--REDNYVPPRSLFDRPTPQ-LARLRRELK----SQRFRGSFKPNMPIPGLKPQL 2165
Fly 2166 PTKPLTEPEAM-AEWCVFEDMAILHVLVNLQGLPCSLMLLSPGQTPNWDLVSEMVNFCSKTYRSA 2229
Fly 2230 RQCRWRYETHIQPREEGKVVESPKKQKKLKPTLRTEYLKSPLRYLRTTQLYVSDNNASFYKTMRS 2294
Fly 2295 RFDSIKTAYLKKAPPPKRQFSAPSLMNPKHMEVLQEFGILN--YDQP---VSP---------QNI 2345
Fly 2346 AAMKANKIREKQRGQQMSQPPVGVGVVQQMQQQSQQ---QQQPAPPPLPQQQQPQQVVQQVQQQQ 2407
Fly 2408 -----QQQQQQQQQQVVQQQLPTVSNVQQTLPVQQT------------VELVQQQPTTTT 2450 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
dom | NP_001286676.1 | HSA | 543..614 | CDD:214727 | 14/70 (20%) |
ASF1_hist_chap | <674..831 | CDD:304562 | 50/309 (16%) | ||
FAM176 | <824..>868 | CDD:291517 | 11/80 (14%) | ||
SNF2_N | 952..1238 | CDD:278600 | 110/306 (36%) | ||
DEXDc | 969..1108 | CDD:238005 | 57/156 (37%) | ||
Helicase_C | 1692..1806 | CDD:278689 | 63/114 (55%) | ||
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | 11/56 (20%) |
PHD1_CHD_II | 380..422 | CDD:277006 | 0/41 (0%) | ||
PHD2_CHD_II | 440..482 | CDD:277007 | 2/41 (5%) | ||
CHROMO | 490..558 | CDD:237991 | 8/67 (12%) | ||
CHROMO | 615..667 | CDD:214605 | 10/57 (18%) | ||
SNF2_N | 734..1028 | CDD:278600 | 110/306 (36%) | ||
DEXDc | 751..907 | CDD:238005 | 57/156 (37%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 63/113 (56%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 8/71 (11%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 44/240 (18%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45467170 | |
Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I705 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |