DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dom and CG7376

DIOPT Version :9

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:NP_001261471.1 Gene:CG7376 / 38715 FlyBaseID:FBgn0035689 Length:1270 Species:Drosophila melanogaster


Alignment Length:1564 Identity:286/1564 - (18%)
Similarity:468/1564 - (29%) Gaps:642/1564 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   621 KSFWSNVEKLVEYKHQTKI-EEKRKQALDQHLSFIVDQTEKFSQQLVEGMNKSVADTPSLNSSRL 684
            |..|...:.|||:|.:..| .||.:.|..:.|.|                 :|:           
  Fly    28 KKRWVFKDNLVEHKEEILICIEKCQNARTRKLKF-----------------RSI----------- 64

  Fly   685 TSPKRESDDDFRPESGS----EDDEETIAKAEEDAADVKEEVTALAKESEMDFDDFLNDLPPGYL 745
                       |.||||    ...|:|..:|.|...:|.|:|..|.      |.||...|     
  Fly    65 -----------RQESGSCILVLSHEQTHVRAREIEMEVGEQVLPLF------FKDFRGSL----- 107

  Fly   746 ENRDKLMKEEQSSAIKTETPDDSDDSEFEAKEASDDDENTISKQEEAEQEIDHKKEIDELEADND 810
                                      |||.                |:||.:||:.:....... 
  Fly   108 --------------------------EFEV----------------AQQEKEHKRPLKTYVTTK- 129

  Fly   811 LSVEQLLAKYKS----EQPPS---PKR-----RKLAPRDPELDSDDDSTAVDSTEESEDAATEDE 863
             ..:.|..|::.    ||..|   |||     ||...|                           
  Fly   130 -LYDALYEKHRQTVHVEQERSLDLPKRFQSQLRKYQQR--------------------------- 166

  Fly   864 EDLSTVKTDTDMEEQDEQEDGLKSLMADADATSGAAGSGSTAGASGNKDDMLNDAAALAESLQPK 928
                ||......|:|                                                  
  Fly   167 ----TVSWMLGREQQ-------------------------------------------------- 177

  Fly   929 GNTLSSTNVVTPVP--FLLKHSL----REYQHIGLDWLVTMNER--KLN----GILADEMGLGKT 981
                     :|.||  |::.|::    |.::|..........|.  |::    ||||||||||||
  Fly   178 ---------ITQVPANFIVLHAIDGITRVFKHKYCLQFYPFEEEIPKISLPPGGILADEMGLGKT 233

  Fly   982 IQTIALL------------------------------------------------AHLACAK-GN 997
            ::.:|:|                                                ..:.|.| ..
  Fly   234 VEFLAMLLMNPRPQDSYRNDYWHQRLEEFSDEVPLKRSRISKKDEVFCICTKKHGKRVQCTKCRR 298

  Fly   998 WG-------------PHL----------------------IVVPSSVMLNWEMEFKKW-CPGFKI 1026
            |.             |||                      ||.|:::.:.|..|..|. .|..|:
  Fly   299 WQHEMCMTISEKSDLPHLCPSCWSELVKSGERLVESGATIIVSPNAIKMQWFEEIHKHISPSLKV 363

  Fly  1027 LTYYGSQKERKLKRVGWTKP---NAFHVCITSYKLV---------------VQDQQSFRRK---- 1069
            |.|:|      |....|..|   ..:.|.:|.|.::               ::.||.:.|.    
  Fly   364 LLYFG------LHSTFWVSPFDLAQYDVVLTDYTILRNEIYHTTDFKSDRQMRHQQRYMRPNSPL 422

  Fly  1070 ---KWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFL-MPYVFSS 1130
               .|..:.|||||.:::..|...:::.......|..:|||     :.||..|:.|: .|.|.  
  Fly   423 LMVNWWRVCLDEAQMVESSTSAAAEMVRMLPAINRWAVTGT-----IDELPPLLEFVGRPEVC-- 480

  Fly  1131 HREFKEWFSNPMTGMIEGNMEYN---ETLITRLHKVIRPFLLRRLKKEVEKQM--PKKYEHVITC 1190
             |....|.:      ::...:.|   |.|:    :::...|.|..|.:||.::  |.:.|.|...
  Fly   481 -RPPDAWQT------VDKAFQLNYKCEPLL----ELLEHSLWRTCKSKVEHELGIPPQTEVVHRL 534

  Fly  1191 RLSN------RQRYL--YEDFMSR-AK-TRETLQTGNLLS---------VINVLMQLRKVCNHPN 1236
            .|||      |:.:|  :|.|::. || ||......:.|:         ::...:::|:.|:.|.
  Fly   535 ELSNVESLYYREEHLKCHEQFLAAVAKHTRHNADNSSCLASISPQLLRIILKPFLRIRQTCSVPV 599

  Fly  1237 MFEARPTISPFQMDGITFHTPRLVCDI-----------------------------------MEY 1266
            :|.:..:.:.:      .|...|:..:                                   ::|
  Fly   600 VFNSNVSSTDY------LHPQDLLARLKSNNENECKTELRTWASSYNGLAAIYFIKNDFPQAIKY 658

  Fly  1267 --------DPFTQINLETLNLLLLH-----LEQTMTAYVSHK-------------SRL------- 1298
                    :.:.:.|:...::|.:|     |:.:..|...||             |||       
  Fly   659 YNLLLKLANEYNEQNISVDSVLQIHAIYNLLQASSLAPAEHKLTELEHKKYQAQMSRLEWKYLED 723

  Fly  1299 --------LAPPRKLIEDI---------DTAPLPAPRCPNGKYRFH----IRVRSAELAQRIKLN 1342
                    |:...:.:|.:         .|..|.|... |.|...|    .:||.....|.|.:.
  Fly   724 NTRVLESALSSYNENLEKVSELEKRFEGSTLDLLATMV-NHKTSLHDAIWNKVRDDFFRQNISVE 787

  Fly  1343 AVK-----VGASPAMRLEGSKIMPMRN-LLPSGRVLKRV---SASINPVNMALKPVVINSVVTTT 1398
            .::     .|....|.:..:|:..::: |:.....||.|   :.......:.|...:||.:...|
  Fly   788 RLENVNSMAGMLYFMDIWHNKLQNLKSTLIAEFEFLKGVMQQACEAIKTGVLLSMEIINFIENVT 852

  Fly  1399 SSSTTASSPTGALSVLSNSKLLGARSQINAPTPAKVAKTMQDGKPFFYLTPATNSGAAGARLTLT 1463
                          |...:.:|.|    |...|.|..|...                  .||.|.
  Fly   853 --------------VCHLTDILDA----NKDKPVKPKKHRY------------------CRLCLI 881

  Fly  1464 SKTTAS------ASTTTSRTTVTASTTSGQQLIRDPIVKDLATHVKSTVQKQSIANGKTEPEEET 1522
            ..:...      |.....:.|||....:....|  ..:|.:...::|   ||..:..|.|.:.:.
  Fly   882 RDSLNQFECLLFAKKLDEKATVTEGLENPSMEI--SFIKSIFAFLRS---KQDFSEWKEECQSKL 941

  Fly  1523 E----AEDPYKVQELIQMRKEQRLAALKRMAMINRR--RTDATPIYGEDCREAIQRCMQATRSLK 1581
            |    .:|..|.|....:..|..:.|...:.|...|  .||...   |.....|..| |....|:
  Fly   942 ELLSCLQDLVKFQIKYWIEVEYMVKAFDELEMCKMRILLTDDPE---EQSNYRILAC-QLDEQLQ 1002

  Fly  1582 RSTWQTR----GYANCCTAMAHRNGWSLNHLLKSFEERCADLKPV----FANFVIYVPSVCAPRI 1638
            .:.:..:    .:...|..:.:         ||..:|..|| ||.    ..:.|.||..||.   
  Fly  1003 FNQYNLQTSQLNFTRLCGRLKY---------LKHLKEDSAD-KPCPICQTQDDVRYVMMVCG--- 1054

  Fly  1639 RRYVQNLSSTHWQHEQRIENIVDQALRPKLALLHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLR 1703
                      |:..:..::::..:..|..:           ||.|..|         |...:|..
  Fly  1055 ----------HFVCQHCLDSMRRKNGRAGV-----------TKCPLCR---------QDSPQLYY 1089

  Fly  1704 QLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQ-------RQILME-----RFN 1756
            .::...|:.:|....||:..|:|        :.|::.|....|:       :.||:|     ..|
  Fly  1090 SVRPGAHKSIIGDFSTKISSVVE--------LVLKIKGENEQEKIIVFSQWQAILIEIARALSLN 1146

  Fly  1757 GDK------------------RIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCH 1803
            |.:                  .:.|.::....|..|:||..|..|...:...||..:.||..|.|
  Fly  1147 GIQFRNKCTNKDFDDFKNPLSNVTCLLMPLSKGSKGLNLIEATHVFLVEPILNPGDERQAIGRIH 1211

  Fly  1804 RIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTY--------FKSSTIKDLF 1860
            |.||.|...::|.:...|||.|||.           .|...:.|||.        ....::|.||
  Fly  1212 RFGQKRPTKVHRFIVNETIEENILS-----------LITSADDTTTLSTHWDLENMTLDSLKKLF 1265

  Fly  1861 TMEQ 1864
            .:::
  Fly  1266 ILKE 1269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727
ASF1_hist_chap <674..831 CDD:304562 33/172 (19%)
FAM176 <824..>868 CDD:291517 8/51 (16%)
SNF2_N 952..1238 CDD:278600 88/426 (21%)
DEXDc 969..1108 CDD:238005 50/252 (20%)
Helicase_C 1692..1806 CDD:278689 30/143 (21%)
CG7376NP_001261471.1 SNF2_N 221..601 CDD:278600 85/403 (21%)
PHD_SF 281..320 CDD:304600 6/38 (16%)
TPR 636..669 CDD:197478 1/32 (3%)
RING 1037..1083 CDD:238093 11/78 (14%)
HepA <1096..1238 CDD:223627 38/160 (24%)
Helicase_C 1108..1214 CDD:278689 24/113 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467177
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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