DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and dbpb

DIOPT Version :9

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_005157954.1 Gene:dbpb / 569109 ZFINID:ZDB-GENE-100922-6 Length:374 Species:Danio rerio


Alignment Length:377 Identity:122/377 - (32%)
Similarity:168/377 - (44%) Gaps:93/377 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 GGNPGQNNNNNNGNNSGNSNNNSNNNVSSVQHVANAVAAAVIANEHHNHLNSLKARFQ------- 393
            |.:|...|::..|......:.||..|:.|:      :...|..::.......:|.:.:       
Zfish    18 GASPQFGNSSQAGVTHNGGHLNSTGNLKSL------LQLPVKCDQRVKDCGEMKGKERLDIDEDS 76

  Fly   394 ----PASSGRKSPFLGFICKSNGKSTSNSKEIICPDDKYKEEGDIWNVEAQTAFLGPNLWDKTLP 454
                |..:|..:   |.:..|||..|.:...               |.....:||||.||::|||
Zfish    77 LGRCPLRNGCSN---GLVTDSNGAGTGSFSN---------------NSNNNNSFLGPLLWERTLP 123

  Fly   455 YDADLKVTQYADLDEFLSENN-----------------------IPDG----LPGTHLGHSSGLG 492
            .|..|...||.||:|||:||.                       :|:.    || |...|.|...
Zfish   124 CDGGLFQLQYMDLEEFLTENGMSSMHNTSNSTSAQIPSQSSQSAVPNQGSQCLP-TSPPHCSSSS 187

  Fly   493 HRSDSLGHAAGLSLGLGHITTKR----------------ERSPSPSDCISPDTLNPPS------- 534
            ..:.:...:..| |||...|.:.                |.:||||....|....||:       
Zfish   188 SPTSATASSPSL-LGLDMHTPQSMMGSTDCLHGTPPGSLEPTPSPSSTTCPPLPTPPATNCNELL 251

  Fly   535 ------PAESTFSFASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRRKNNI 593
                  ||:...|.......||||...||||:|||||||||:||..||::|||:|||:||.|||.
Zfish   252 APFDPDPADVALSSVPGQEAFDPRRHHFSDEDLKPQPMIKKARKMLVPEDLKDEKYWSRRCKNNE 316

  Fly   594 AAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLSKFQ 645
            ||||||||||.|||||::||.:||:|||.|.|||..:::|....|..|:|::
Zfish   317 AAKRSRDARRLKENQISVRAAFLERENAALRQEVADMRKELGRCRNILNKYE 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 bZIP_HLF 580..639 CDD:269843 37/58 (64%)
coiled coil 581..639 CDD:269843 36/57 (63%)
dbpbXP_005157954.1 bZIP_HLF 303..362 CDD:269843 37/58 (64%)
coiled coil 304..362 CDD:269843 36/57 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586461
Domainoid 1 1.000 87 1.000 Domainoid score I7946
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1023460at2759
OrthoFinder 1 1.000 - - FOG0000980
OrthoInspector 1 1.000 - - otm24802
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X901
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.810

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