DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and tef

DIOPT Version :9

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001017319.1 Gene:tef / 550073 XenbaseID:XB-GENE-962732 Length:296 Species:Xenopus tropicalis


Alignment Length:289 Identity:110/289 - (38%)
Similarity:152/289 - (52%) Gaps:36/289 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 LKARFQPASSGRKSPFLG--------FICKSNGKSTSNSKEIICPDDKYKEEGD---IWNVEAQT 441
            ::|...|:|....||.||        .:.::..|....:::   ..||.|.:.|   ..|....:
 Frog     1 MEASSCPSSPVTPSPLLGGSFPIVLRKLLENPPKDFLETRD---EKDKSKLDKDDDHDCNSLVAS 62

  Fly   442 AFLGPNLWDKTLPYDADLKVTQYADLDEFLSENNIPDGLPGTHLGHS--------SGLGHRSDSL 498
            |.|.|.:||||:|||.:....:|.||||||.||.||..  .|.|..:        |.|...|:..
 Frog    63 ASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPSS--PTQLAQALQNPLVPVSELESDSEPA 125

  Fly   499 GHAAGLSLGLGHITTKRE--RSPSPSDCISPDTLNP----------PSPAESTFSFASSGRDFDP 551
            ..:|...|....:..|.|  .|.|.::...|..::|          |.|::...|.......|||
 Frog   126 STSAASPLSPSVLLQKSEVKDSDSKAEEDPPSPIDPEKVEIQVNFNPDPSDLLLSTVPGEELFDP 190

  Fly   552 RTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYL 616
            |...|::|||||||||||::|.:||::|||:|||.||.|||:||||||||||.|||||.:||.:|
 Frog   191 RKHRFAEEELKPQPMIKKAKKIYVPEDLKDEKYWTRRNKNNVAAKRSRDARRLKENQITVRAAFL 255

  Fly   617 EKENATLHQEVEQLKQENMDLRARLSKFQ 645
            ||||:.|..||..|::|....|..:||::
 Frog   256 EKENSALRSEVADLRKELSKCRNIISKYE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 bZIP_HLF 580..639 CDD:269843 37/58 (64%)
coiled coil 581..639 CDD:269843 36/57 (63%)
tefNP_001017319.1 T4BSS_DotH_IcmK 132..>184 CDD:289093 10/51 (20%)
bZIP_HLF 219..278 CDD:269843 37/58 (64%)
coiled coil 220..278 CDD:269843 36/57 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 84 1.000 Domainoid score I8126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1023460at2759
OrthoFinder 1 1.000 - - FOG0000980
OrthoInspector 1 1.000 - - otm47776
Panther 1 1.100 - - O PTHR11988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X901
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.020

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