DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and nfil3

DIOPT Version :9

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001015710.1 Gene:nfil3 / 548427 XenbaseID:XB-GENE-479624 Length:462 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 bZIP_HLF 580..639 CDD:269843
coiled coil 581..639 CDD:269843
nfil3NP_001015710.1 bZIP_NFIL3 72..131 CDD:269842
coiled coil 73..131 CDD:269842
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 79..95
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 101..122
Vert_IL3-reg_TF 130..461 CDD:368956
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..304
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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