DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and Tef

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_062067.2 Gene:Tef / 29362 RGDID:3841 Length:301 Species:Rattus norvegicus


Alignment Length:237 Identity:104/237 - (43%)
Similarity:139/237 - (58%) Gaps:22/237 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 KEEGDIWNVEAQTAFLGPNLWDKTLPYDADLKVTQYADLDEFLSENNIPDGLPGTHLGHSSGL-- 491
            ::|....:..|.:|.|.|.:||||:|||.:....:|.||||||.||.||  ...|||..:..|  
  Rat    61 EDESAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIP--ASPTHLAQNLLLPV 123

  Fly   492 ----GHRSDSLGHAAGLS-----------LGLGHITTKRER-SPSPSD--CISPDTLNPPSPAES 538
                |..|.|...|:..|           :.....:.::|| :|||.|  |:..|....|.||:.
  Rat   124 AELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADL 188

  Fly   539 TFSFASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRRKNNIAAKRSRDARR 603
            ..|....|..|:||...|::|:|||||||||::|.|||||.||:|||.||:|||:||||||||||
  Rat   189 VLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARR 253

  Fly   604 QKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLSKFQ 645
            .|||||.:||.:|||||..|..||.:|::|....:..:||::
  Rat   254 LKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYE 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 56/97 (58%)
bZIP_HLF 580..639 CDD:269843 37/58 (64%)
coiled coil 581..639 CDD:269843 36/57 (63%)
TefNP_062067.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 1/8 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 130..174 10/43 (23%)
bZIP_HLF 230..288 CDD:269843 37/57 (65%)
coiled coil 231..288 CDD:269843 36/56 (64%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 233..253 16/19 (84%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 254..261 5/6 (83%)

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