DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and Cebpb

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_077039.3 Gene:Cebpb / 24253 RGDID:2327 Length:297 Species:Rattus norvegicus


Alignment Length:268 Identity:63/268 - (23%)
Similarity:97/268 - (36%) Gaps:69/268 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 AVIANEHHNHLNSLKARFQPASSGRKSPFLGFICKSNGKSTSNSKEIIC----PDDKYKEEGDIW 435
            |..|..||:.|:.|.|....|...:|....|::  |.|::.:.:....|    |....|.|....
  Rat    78 AAPAPAHHDFLSDLFADDYGAKPSKKPSDYGYV--SLGRAGAKAAPPACFPPPPPAALKAEPGFE 140

  Fly   436 NVEAQTAFLGPNLWDKTLPYDADLKVTQYADLDEFLSENNIPDGLPGTHLGHSSGLGHRSDSLGH 500
            ..:.:.|                                   |..|....|....|   ...||:
  Rat   141 PADCKRA-----------------------------------DDAPAMAAGFPFAL---RAYLGY 167

  Fly   501 AAGLSLGLGHITTKRERSPSPSDCISPDTLNPPSPAESTFSFASSGRDFDPRTRAFSDEELKPQP 565
            .|..|...|.::|....||       |.|   ||||::..:.|:          .|:.....|  
  Rat   168 QATPSGSSGSLSTSSSSSP-------PGT---PSPADAKAAPAA----------CFAGPPAAP-- 210

  Fly   566 MIKKSRKQFVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQL 630
              .|::.:...|:|.|: |..||.:||||.::|||..:.:..:...:...|..||..|.::||||
  Rat   211 --AKAKAKKAVDKLSDE-YKMRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQL 272

  Fly   631 KQENMDLR 638
            .:|...||
  Rat   273 SRELSTLR 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 25/94 (27%)
bZIP_HLF 580..639 CDD:269843 22/59 (37%)
coiled coil 581..639 CDD:269843 22/58 (38%)
CebpbNP_077039.3 Required for Lys-134 sumoylation. /evidence=ECO:0000250|UniProtKB:P17676 1..22
Required for MYC transcriptional repression. /evidence=ECO:0000250|UniProtKB:P28033 22..105 9/26 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 172..201 11/38 (29%)
bZIP_CEBPB 219..286 CDD:269860 24/63 (38%)
coiled coil 223..284 CDD:269860 22/59 (37%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 227..247 9/19 (47%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 249..256 0/6 (0%)
Blue background indicates that the domain is not in the aligned region.

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