DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and zip-7

DIOPT Version :9

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_502961.1 Gene:zip-7 / 178459 WormBaseID:WBGene00013100 Length:185 Species:Caenorhabditis elegans


Alignment Length:116 Identity:37/116 - (31%)
Similarity:66/116 - (56%) Gaps:11/116 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 SPDTLNPPSPAESTFSFASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRRK 590
            :|...:..||:.|:.|..:|.:  :.::.:...::.||.|         ||:..||:.|..|||:
 Worm    59 NPHATSSFSPSSSSTSSTTSSQ--NQQSGSSGSKKKKPVP---------VPENQKDEAYLDRRRR 112

  Fly   591 NNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARL 641
            ||.||::||::|::.:...::|..|||:||..|...|:||:.:|..:|..|
 Worm   113 NNEAARKSRESRKKVDQDNSVRVTYLERENQCLRVYVQQLQLQNESMRQHL 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 bZIP_HLF 580..639 CDD:269843 24/58 (41%)
coiled coil 581..639 CDD:269843 23/57 (40%)
zip-7NP_502961.1 bZIP 102..161 CDD:389750 24/58 (41%)
coiled coil 103..161 CDD:269834 23/57 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1023460at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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