DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and cebpg

DIOPT Version :9

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_571961.1 Gene:cebpg / 140816 ZFINID:ZDB-GENE-020111-5 Length:163 Species:Danio rerio


Alignment Length:83 Identity:25/83 - (30%)
Similarity:40/83 - (48%) Gaps:14/83 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 KQFVPDELK-------DDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQ 629
            |...|.::|       .|:|..||.:||:|.|:||...:||......|...|::||..|..:::.
Zfish    53 KATAPSKMKKSNMDKDSDEYRQRRERNNLAVKKSRMRSKQKAQDTQQRVNELKEENERLEAKIKL 117

  Fly   630 LKQENMDLRARLSKFQDV 647
            |.:|       ||..:|:
Zfish   118 LSKE-------LSVLKDL 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 bZIP_HLF 580..639 CDD:269843 20/65 (31%)
coiled coil 581..639 CDD:269843 19/57 (33%)
cebpgNP_571961.1 bZIP_CEBPG 67..127 CDD:269861 21/66 (32%)
coiled coil 69..127 CDD:269861 21/64 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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