DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and Pdp1

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_061503537.1 Gene:Pdp1 / 1276989 VectorBaseID:AGAMI1_009149 Length:465 Species:Anopheles gambiae


Alignment Length:580 Identity:272/580 - (46%)
Similarity:316/580 - (54%) Gaps:168/580 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 NDSGKSSATGGGGAG----ATSNNGVNAWALQQQQQTAALHHQQQQQHQQQQQHQQHLQQHHQAH 147
            |.||.:.|.||||.|    ...|.||::..|......:.|                         
Mosquito    35 NGSGPTGAGGGGGPGGGHNGMGNQGVHSQLLGPMPPPSIL------------------------- 74

  Fly   148 HQHVLQQQQQQQQQHSQHQHQQQHHGHPLHPHHTHQQQQQQQQQQQPPPQHHQQQQQQHAQQQQQ 212
               .:....||...:.||.......|...:|....|||||||||||      ||||.||.|||||
Mosquito    75 ---PIGMPLQQVVHNLQHLTNVGGLGMGGNPQQQQQQQQQQQQQQQ------QQQQHQHQQQQQQ 130

  Fly   213 QHHAAQLAHTLSSAAVAAAAGNTGGNTNPHSIFGTGNFHYKTNNSWTLPTLT--YQRIYQENPHY 275
            .|.     :.|:|        ||.|....     ||..|..|.|   ||..:  .|.|:|     
Mosquito   131 THQ-----NLLTS--------NTPGANGL-----TGIHHGGTQN---LPPTSQLLQAIHQ----- 169

  Fly   276 QRNSFMDPQSNAAAAAAAAAASCNAAAVAAAAAVASGNQGSNGNASGNGNAVVAATGNGNGGNPG 340
                                                       |.|.|         |.||.|..
Mosquito   170 -------------------------------------------NTSNN---------NNNGANNN 182

  Fly   341 QNNNNN-NGNNSGNSNNNSNNNVS--SVQHVANAVAAAVIANEHHNHLNSLKARFQPASSGRKSP 402
            .||||. |.||:.|.|||:||:::  .||.:.          .||.:|                 
Mosquito   183 NNNNNTINLNNNSNGNNNNNNSITQYQVQQLW----------RHHAYL----------------- 220

  Fly   403 FLGFICKSNGKSTSNSKEIICPDDKYKEEGDIWNVEAQTAFLGPNLWDKTLPYDADLK---VTQY 464
                    ||| |||:|: ||.:||:|||.|.||||..:|||||||||||||||:|||   |::|
Mosquito   221 --------NGK-TSNNKD-ICGEDKHKEENDPWNVETHSAFLGPNLWDKTLPYDSDLKVHQVSEY 275

  Fly   465 ADLDEFLSENNIP-DGLPGTHLGHSSGL-GHRSDSLGHAAGLSL-GLGHITTKRERSPSPSDCIS 526
            ||||||||||.|| ||:|.::||:|:.| |.||||:||.||||| |||.:|||||||||||||:|
Mosquito   276 ADLDEFLSENGIPYDGIPNSNLGNSTSLTGQRSDSIGHCAGLSLSGLGQVTTKRERSPSPSDCMS 340

  Fly   527 PDTLNPPSPAESTFSFA----SSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWAR 587
            |:|:||||||:|.|...    ||.||||||||||||||||||||||||||||||||:||||||||
Mosquito   341 PETMNPPSPADSIFDVTAFSMSSTRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDEMKDDKYWAR 405

  Fly   588 RRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLSKFQDV 647
            |||||:||||||||||.||||||:||.||||||..||:||||||||||:|||||||:|:|
Mosquito   406 RRKNNMAAKRSRDARRMKENQIALRAGYLEKENMNLHREVEQLKQENMELRARLSKYQEV 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 82/98 (84%)
bZIP_HLF 580..639 CDD:269843 50/58 (86%)
coiled coil 581..639 CDD:269843 49/57 (86%)
Pdp1XP_061503537.1 None

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