DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and cebp1

DIOPT Version :9

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_571912.1 Gene:cebp1 / 114453 ZFINID:ZDB-GENE-010611-1 Length:169 Species:Danio rerio


Alignment Length:131 Identity:40/131 - (30%)
Similarity:65/131 - (49%) Gaps:20/131 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   522 SDCISPDTLNPPSPAESTFSFASSGRDFDPRTRAFSDEELKPQP---MIKKSRKQFVPDELKDD- 582
            |.|::    ||.:..|.:...:|:      .|:.|: :.|:|.|   :...::|:.|.   ||. 
Zfish    48 SSCLN----NPNTNTERSVQQSSA------HTQDFA-QFLEPPPASALRLCAQKRGVS---KDSA 98

  Fly   583 KYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLSK--FQ 645
            :|..||.:||||.::|||..|::......||..|:.||..|...:::|..|...||..||:  .|
Zfish    99 EYRQRRERNNIAVRKSRDKARRRIQMTQQRALQLQDENHRLQVHIQRLLHEVEALRHYLSQRHLQ 163

  Fly   646 D 646
            |
Zfish   164 D 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 bZIP_HLF 580..639 CDD:269843 22/59 (37%)
coiled coil 581..639 CDD:269843 21/58 (36%)
cebp1NP_571912.1 bZIP_CEBP 96..155 CDD:269841 21/58 (36%)
coiled coil 97..155 CDD:269841 20/57 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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