DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and CEBPE

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001796.2 Gene:CEBPE / 1053 HGNCID:1836 Length:281 Species:Homo sapiens


Alignment Length:245 Identity:50/245 - (20%)
Similarity:73/245 - (29%) Gaps:97/245 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   486 GHSSGLGHRSDSLGHAAGLSLGLGHITTKRER--------SPSPSD------------------- 523
            |..:|.|...|...|.|.:.|. .:|.:..|:        .|:|..                   
Human    22 GGRAGPGELGDMCEHEASIDLS-AYIESGEEQLLSDLFAVKPAPEARGLKGPGTPAFPHYLPPDP 85

  Fly   524 ---CISPDTLNPPSPAESTFSFASSGRDFDPRTRAFSDEELKPQ--------------------- 564
               ...|.|..|...|.....::|.| .:|||..|..:|...|:                     
Human    86 RPFAYPPHTFGPDRKALGPGIYSSPG-SYDPRAVAVKEEPRGPEGSRAASRGSYNPLQYQVAHCG 149

  Fly   565 --------------------------------PMIK---------KSRKQFVPDELKDDKYWARR 588
                                            |::|         |.:|....|.|   :|..||
Human   150 QTAMHLPPTLAAPGQPLRVLKAPLATAAPPCSPLLKAPSPAGPLHKGKKAVNKDSL---EYRLRR 211

  Fly   589 RKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLR 638
            .:||||.::|||..:::..:...:......||..|...||||.||...||
Human   212 ERNNIAVRKSRDKAKRRILETQQKVLEYMAENERLRSRVEQLTQELDTLR 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 31/186 (17%)
bZIP_HLF 580..639 CDD:269843 21/59 (36%)
coiled coil 581..639 CDD:269843 21/58 (36%)
CEBPENP_001796.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 3/7 (43%)
PHA03247 <62..192 CDD:223021 16/130 (12%)
bZIP_CEBPE 202..262 CDD:269863 23/63 (37%)
coiled coil 204..262 CDD:269863 22/61 (36%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 208..228 9/19 (47%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 230..237 0/6 (0%)

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