DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompA and nyo

DIOPT Version :10

Sequence 1:NP_524831.2 Gene:nompA / 45587 FlyBaseID:FBgn0016047 Length:1557 Species:Drosophila melanogaster
Sequence 2:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster


Alignment Length:587 Identity:144/587 - (24%)
Similarity:235/587 - (40%) Gaps:115/587 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   907 PITRCEESDNFKQIAARHKMRRHFVRRALIVPSLIQCERECIESRDFVCRSFNYRDSAASGYEDR 971
            |...||    ||:|:.:.......|.:.  :.::.:|...|:.| .:.|.|::|.|:.       
  Fly   291 PSKLCE----FKRISGKILKTVDSVYQD--INTIDECRDLCLNS-PYRCHSYDYNDTG------- 341

  Fly   972 DRDRDRDSPNCELSDRDSREL-DIHDPGTFDASNYDFYERSIGRSDGECMDVTQTCNEEGMEFTI 1035
                   ...|.||......| |:.|| ..|......||.|      .|.:|:..|....|...|
  Fly   342 -------DMVCRLSHHSRATLTDVMDP-YLDVPEAATYELS------ACYNVSIECRSGEMITKI 392

  Fly  1036 RTPEGFLGRIYTYGFYDRCFFRGNGGTVNVLRLSGPQGYPD--CGTQR--YGDTLTNIVVVQFSD 1096
            ||.:.|.|::|..|....|....|    |.|......||.|  |..::  ||..: |.:|:|..|
  Fly   393 RTSKLFDGKVYAKGAPKSCAVNVN----NSLEFDFRMGYNDLECNVRQSAYGRYM-NDIVIQHHD 452

  Fly  1097 NVQTSRDKRYNLTCIFRGPGEAVVSSGYIGAGSGSPIPIEYLPAENTLSSKVRL---SILYQ--- 1155
            .:.||.|....::|.:....:.|::...:|. :|.        .|::||.::.:   :::.:   
  Fly   453 MIVTSSDLGLAVSCQYDLTNKTVLNDVDLGV-TGE--------IESSLSEEITIDSPNVIMKITS 508

  Fly  1156 --GRPTTTIA-VGDPLTFRLEAQDGYNHVTDIFATNVVARDPYSGRSIQLIDRFGCPVDPFVFPE 1217
              |.....:| |||||..|.|..:. |...:||...:||.|......|.|||..|||.|.::...
  Fly   509 RDGSDMKRMAEVGDPLALRFEIVEP-NSPYEIFVRELVAMDGSDSAEITLIDANGCPTDQYIMGT 572

  Fly  1218 LDKL-RDGDTLEARFNAFKIPESNFLVFEATVRSCREGCQPAYC---PGPAGRQEP--SFGRRRR 1276
            :.|| ::...|.::|:|||.|.|..:.|.|.|..|...|:|..|   .|.:|..:.  |:||::|
  Fly   573 IQKLAQNRKVLLSQFDAFKFPSSEVVQFRALVTPCIPRCEPVICDSEDGASGELKSLVSYGRKKR 637

  Fly  1277 S-LNTTEIPEPEALALEGSSQLEASTLDE-VTVVNSTTVSATLGQVPLNETQLGEKTKETEEPEQ 1339
            | ||.|:..|   ..:....:.:...:|: :.::.|..::...|..|.:.|..........|   
  Fly   638 SVLNGTDGAE---FLISTRHRRDVGPVDDNILLMQSIQITDKFGFQPEDGTTTHGNDSGPHE--- 696

  Fly  1340 VREMIEVFETREEIEKESYPRKLVAPVETVCMTPAEYHGLITAIILLMILLFSITLVAGLGYRRY 1404
                                 |..|.|....:|....:|||.|..|.::...||..:        
  Fly   697 ---------------------KAYAGVAQDKLTCLNGYGLIMAGALFLLAQLSIFGI-------- 732

  Fly  1405 WKSI----SKNRLVDRHSPIHSLGHSHSSIRTHERFTEIGHMPNLNGGGGGAAAGT--GGGANQS 1463
            ||::    ||.|.:.:|.|..::.:...::.         :.|..|...|.:|:||  ||.|..:
  Fly   733 WKTVQRRTSKERYLYQHEPTPTITYGAPTML---------YGPPPNSSAGSSASGTSYGGSAKDT 788

  Fly  1464 AS 1465
            .|
  Fly   789 LS 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompANP_524831.2 PAN_AP_HGF 150..231 CDD:238532
PAN_AP_HGF 244..>303 CDD:238532
PAN_AP_HGF 349..424 CDD:238532
PHA03247 <579..907 CDD:223021 144/587 (25%)
PAN_AP_HGF 914..1011 CDD:238532 21/97 (22%)
ZP 1025..1264 CDD:214579 73/255 (29%)
nyoNP_651871.2 PAN_1 121..198 CDD:459635
PAN_AP_HGF 208..286 CDD:238532
PAN_1 295..358 CDD:459635 17/83 (20%)
ZP 382..618 CDD:214579 72/250 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.