DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompA and CG17111

DIOPT Version :9

Sequence 1:NP_524831.2 Gene:nompA / 45587 FlyBaseID:FBgn0016047 Length:1557 Species:Drosophila melanogaster
Sequence 2:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster


Alignment Length:677 Identity:148/677 - (21%)
Similarity:221/677 - (32%) Gaps:237/677 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   942 QCERECIESRDFVCRSFNYRDSAASGYEDRDRDR------DRDSP---NCELSDRDSRELDIHDP 997
            :|...|.....|.|.|.::   |.|...:|:|.|      .|.||   .|.|||||...    .|
  Fly   181 ECAERCFFETQFRCLSASF---APSYRNNRERFRGEAGPGQRPSPRLGRCMLSDRDKTV----QP 238

  Fly   998 GTFDASNYD------------------FYE------------RSIGRSDGE-------------- 1018
            ..|.|:.||                  .||            |.:|.|..|              
  Fly   239 DAFRAAPYDEEYMENQCHERAIESDNCSYELYANSSFIYAEARYLGLSQKECQAMCSHEAKFYCQ 303

  Fly  1019 -------------------------------------------CMDVTQTCNEEGMEFTIRTPEG 1040
                                                       |:||...|..:.|.......:.
  Fly   304 GVSFYYVNQLSLSECLLHSEDIVSLGPRSLKLRENSVYMRRVKCLDVRVFCTRDEMTIKYNPKDW 368

  Fly  1041 FLGRIYTYGFYDRCFFR--GNGGTVNVLRLSGPQGYPDCG-------TQRYGDT-LTNIVVVQFS 1095
            |:|:||.......|..|  |||..:..|::........||       ||.|..| ::.:||:|.:
  Fly   369 FVGKIYASMHSKDCLARGSGNGSVLLTLQIGSEVKENRCGILRAYEMTQEYQRTFISALVVIQNN 433

  Fly  1096 DNVQTSRDKRYNLTCIFRGPGEAVVSSGY----IGAGSGSPIP--------IEY----LPAENTL 1144
            .||||..|:...:.||   ...|..|.|.    ....|..|:|        :||    .|.|..:
  Fly   434 PNVQTQGDRLIKVGCI---QSNATTSLGVSVRDSSVDSSEPVPSAIALESSLEYTEHMFPHEGVV 495

  Fly  1145 ------------SSKVRLSILYQGRPTTTIAVGDPLTFRLEA----QDGYNH-------VTDIFA 1186
                        |..:::..|.....|..:.:|..|..::.|    |....|       :.|..|
  Fly   496 HYNSSTGPHPHPSISLQILDLSHQHETNDVQIGQNLELQIVAEYSPQQLAEHMELQLAPLPDFRA 560

  Fly  1187 TNVVARDPYSGRSIQLIDRFGCPVDPFVFPELDKLRDG--DTLEARFNAFKIPESNFLVFEATVR 1249
            |::||:...:...:.|||..|||.|..|||.|:::...  ..|.|||:|||...:..:.|:..:|
  Fly   561 TSLVAKTADNENFVLLIDERGCPTDASVFPALERVHTASRSMLRARFHAFKFSGTANVSFDVKIR 625

  Fly  1250 SCREGCQPAYCPGPAGRQEPSFGRRRRSLNTTEIPEPEALALEGSSQLEASTLDEVTVVNSTTVS 1314
            .|.|.|.|:.|      ...|:.||||..:..: ..||                ::.|.|...:|
  Fly   626 FCVERCSPSNC------ISSSWQRRRRQADQPD-RRPE----------------DLRVQNPVYIS 667

  Fly  1315 ATLGQVPLNETQLGEKTKETEE-----------PEQVREMIEVFETREEIEKESYPRKLVAPV-- 1366
            ..:...|    |....|:..||           |:|......::..|..:        |:|.:  
  Fly   668 TVVDVAP----QPDNFTRSQEELPLNYNIRVHGPDQSNTNSYLYGERGVL--------LIAGIDD 720

  Fly  1367 ----ETVCMTPAEYHGLITAIILLMILLFSITLVAGLG-----YRRYWKSISKNRLVDRHSPIHS 1422
                :.||:.    ..|:.|:.:.. |:..:.|:.|.|     |||..|...:.|          
  Fly   721 PLHLDNVCIN----QSLLIALFIFW-LICQVALLFGCGMVLQRYRRLAKLEDERR---------- 770

  Fly  1423 LGHSHSSIRTHERFTEIGHMPNLNGGG 1449
                    |.||.:.|...:...:.||
  Fly   771 --------RLHEEYLEARRVHWADQGG 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompANP_524831.2 PAN_AP_HGF 150..231 CDD:238532
PAN_AP_HGF 244..>303 CDD:238532
PAN_AP_HGF 349..424 CDD:238532
PAN_AP_HGF 914..1011 CDD:238532 26/107 (24%)
ZP 1025..1264 CDD:214579 76/289 (26%)
CG17111NP_651119.2 PAN_1 159..255 CDD:278453 24/80 (30%)
PAN_AP_HGF 270..344 CDD:238532 4/73 (5%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D200714at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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