DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompA and C30H6.5

DIOPT Version :10

Sequence 1:NP_524831.2 Gene:nompA / 45587 FlyBaseID:FBgn0016047 Length:1557 Species:Drosophila melanogaster
Sequence 2:NP_001255948.1 Gene:C30H6.5 / 183068 WormBaseID:WBGene00007823 Length:530 Species:Caenorhabditis elegans


Alignment Length:327 Identity:61/327 - (18%)
Similarity:110/327 - (33%) Gaps:96/327 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 ISDIKEITAANRSDCEDKCLN---EFSFVCRSANFDSTMRSCTLSRFTRRTHPELMEDDPNSDYL 228
            |.|:.|        |..||:.   .....|::..::...::|.||::.|.............|..
 Worm   100 IDDVNE--------CLRKCIQAPMNHKIKCKTVMYNVNTQNCVLSKYARHERTVKKSKGLQIDLY 156

  Fly   229 ENTCLNAERRCDGLAVFVKEENKRLGGPFEVDIFNNM------------------TLEEC--QTM 273
            ||.|.:.|.....||||. |:.:....|....|..|:                  |.::.  .|.
 Worm   157 ENRCASTENETVRLAVFT-EQTRTTSAPVRTSIVGNVIMAPVPNLNGTTTNAPISTTQQAIPTTN 220

  Fly   274 CLR----AEKY----------FCRSVEFD----------------------------DQSKQCIL 296
            .||    .::|          |.::|..|                            |.:...:.
 Worm   221 ELRRVHAVKQYPLDPKNGNVIFSKTVYADQPSPPLPQRFVDRRNRNAKIFLSPRPLVDSTSSVVA 285

  Fly   297 SEEDSISQKDDI-SISSSPTHHFYDLVCLDNQRANDYPDNSVTSHLFSSGRRPDTAFQRYRNSRL 360
            :.:..:..:.|: |::..........|.|:|.        :|.:..|.  :.|:....::..||:
 Worm   286 AAQQQVQLQSDVGSLTKERRQRSERPVVLENL--------AVPAGCFI--KTPNRILHKFEESRI 340

  Fly   361 GGEFHSEITGRSLSECLDECLRQ-TSFQCRSAVYSDRFRTCRLSRYN--QKDGMRIIYDADYDYY 422
            ||.        :|..|:.:|.:. .:|.|.|..||...:.|.|:..|  ...|..::...::||:
 Worm   341 GGV--------TLETCMRQCAQSLQNFYCASINYSFGLKICILNGGNLHLNGGDTLVGSREFDYF 397

  Fly   423 EN 424
            ||
 Worm   398 EN 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompANP_524831.2 PAN_AP_HGF 150..231 CDD:238532 13/66 (20%)
PAN_AP_HGF 244..>303 CDD:238532 15/120 (13%)
PAN_AP_HGF 349..424 CDD:238532 18/77 (23%)
PHA03247 <579..907 CDD:223021
PAN_AP_HGF 914..1011 CDD:238532
ZP 1025..1264 CDD:214579
C30H6.5NP_001255948.1 PAN_AP_HGF 80..159 CDD:238532 13/66 (20%)
PAN_AP_HGF 323..400 CDD:238532 22/87 (25%)
PAN_AP 422..488 CDD:214680
Blue background indicates that the domain is not in the aligned region.

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