DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompA and ZC449.1

DIOPT Version :10

Sequence 1:NP_524831.2 Gene:nompA / 45587 FlyBaseID:FBgn0016047 Length:1557 Species:Drosophila melanogaster
Sequence 2:NP_508855.1 Gene:ZC449.1 / 180775 WormBaseID:WBGene00022611 Length:454 Species:Caenorhabditis elegans


Alignment Length:219 Identity:54/219 - (24%)
Similarity:82/219 - (37%) Gaps:44/219 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NGQTTCKNGLGRVLYERLPNQ---QLQGYDDDVVRDTAPPFRVLEK--CQDLCLRDRSGSNNLVR 83
            ||...||...|  .|..:.|:   .:.|.|..|       :..:|:  |...| .:..|.:....
 Worm   207 NGPLKCKTSSG--YYVVVGNEIVLPISGGDVQV-------YNEVEQGDCAKYC-SENKGPDGSTI 261

  Fly    84 TCTSFDFQPGSRITSFGGNSEYEESLCYLTSEQAGPEGIGSLMLVPNSVHFNEICLTSSRPERE- 147
            .|.|.::.|             .|..|.|....|.|.|.|.|:.....::..:.||    ||.. 
 Worm   262 NCRSLNYFP-------------VEKKCELYGILAEPHGSGKLLENEKVIYAEKFCL----PESPF 309

  Fly   148 -CPSRRYVFERHPRKKLKLPISDIKEIT---AANRSDCEDKCLNEFSFVCRSANFDSTMRSCTLS 208
             |.:.. :|..|.:|.|    |..:.||   |::.:||..|||.:..  |||:.:.|..:.|.|.
 Worm   310 VCQNDE-IFILHVQKTL----SKRRRITTKAASSITDCLRKCLEQDD--CRSSVYISNSKKCELH 367

  Fly   209 RFTRRTHPELMEDDPNSDYLENTC 232
            .....|.....:.|..:..:||.|
 Worm   368 NVDVSTGDYARDSDRETVLIENGC 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompANP_524831.2 PAN_AP_HGF 150..231 CDD:238532 22/83 (27%)
PAN_AP_HGF 244..>303 CDD:238532
PAN_AP_HGF 349..424 CDD:238532
PHA03247 <579..907 CDD:223021
PAN_AP_HGF 914..1011 CDD:238532
ZP 1025..1264 CDD:214579
ZC449.1NP_508855.1 PAN_AP 21..105 CDD:214680
PAN_1 230..303 CDD:459635 18/93 (19%)
PAN_1 317..391 CDD:459635 23/79 (29%)
Blue background indicates that the domain is not in the aligned region.

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