DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompA and pana-1

DIOPT Version :10

Sequence 1:NP_524831.2 Gene:nompA / 45587 FlyBaseID:FBgn0016047 Length:1557 Species:Drosophila melanogaster
Sequence 2:NP_505128.1 Gene:pana-1 / 179207 WormBaseID:WBGene00015857 Length:398 Species:Caenorhabditis elegans


Alignment Length:456 Identity:95/456 - (20%)
Similarity:165/456 - (36%) Gaps:109/456 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IHVLLTTL--VVSLSLSKINGQTTCKNGLGRVLYERLPNQQLQGYDDDVVRDTAPPFRVLEKCQD 69
            :|:|...|  :|:.||              |:.:::.||:.|.......:|:.:     |:||..
 Worm     3 LHILSILLLPIVTSSL--------------RLCFDKSPNKSLFARPLISLRNLS-----LDKCFS 48

  Fly    70 LCL---RDRSGSNNLVRTCTSFDFQPGSRITSFGGNSEYEESLCYLTSEQAGPEGIGSLMLVPNS 131
            .||   |:         ||.|..:...:......|.|:.:.                ..:..|.|
 Worm    49 ACLEMPRE---------TCKSVTYTKKTMNCQLNGKSKQDV----------------KTVKNPMS 88

  Fly   132 VHFNEICLTSSRP-----------ERECPSRRYVFERHPRKKLKLPISD--IKEITAANRSDCED 183
            ..::..|.  .:|           |..|      |...|.|.| :.|.|  ::::...|  ||:.
 Worm    89 DFYHRTCF--DKPSVAIRRDTVASESGC------FTSTPGKVL-IGIVDQLVRDVATVN--DCQA 142

  Fly   184 KCLN---EFSFVCRSANFDSTMRSCTLSRFTRRTHPELMEDDPNSDYLENTCLNAERRC------ 239
            :|.|   ::...|:||.:....:.|.|:..::...|:|..||..|.||||:||:...:.      
 Worm   143 QCSNSQTKYDITCKSAMYYEKDKECILASQSKADIPDLFIDDDKSLYLENSCLDKSDKSVVVKTS 207

  Fly   240 ---DGLAVFVKEENKRLGGPFEVDIFNNMTLEECQT----MCLRAEKYFCRSVEFDDQSKQCILS 297
               .|.:.|.:.|:.|..|..|.......||....:    |.::...|...|....:|:::.:|:
 Worm   208 DIFKGSSKFSENESSRSDGELEPLKTEKTTLSSILSSSTHMDIQLSGYEGPSDSVSNQNREDLLT 272

  Fly   298 EEDSISQKDDISISSSPTHHFYDLVCLDNQRANDYPDNSVTSHLFSSGRR-PDTAFQR-YRNSRL 360
            .:.:.:.....:.:..|...    ..:||.       |.|.:.....||| .||..:. :|..|.
 Worm   273 TKPTTTTTTTTTTTQKPIAP----KVIDNY-------NVVNTPKTEYGRRLRDTRVKSCFREIRP 326

  Fly   361 GGEFHS--EITGRSLSECLDECLRQTSF-----QCRSAVYSDRFRTCRLSRYNQKDGMRIIYDAD 418
            .|:..:  .:...||.:|.|.|...|..     :|:|..:......|.|:.....||.....|..
 Worm   327 MGKMEALRVVKAYSLEQCTDMCRLCTKCLVKQKKCQSVAFDISRELCALASKRLSDGGSFTDDII 391

  Fly   419 Y 419
            |
 Worm   392 Y 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompANP_524831.2 PAN_AP_HGF 150..231 CDD:238532 24/85 (28%)
PAN_AP_HGF 244..>303 CDD:238532 12/62 (19%)
PAN_AP_HGF 349..424 CDD:238532 19/79 (24%)
PHA03247 <579..907 CDD:223021
PAN_AP_HGF 914..1011 CDD:238532
ZP 1025..1264 CDD:214579
pana-1NP_505128.1 PAN_AP_HGF 21..94 CDD:238532 17/102 (17%)
PAN_AP_HGF 110..193 CDD:238532 26/91 (29%)
Blue background indicates that the domain is not in the aligned region.

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