DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompA and cutl-26

DIOPT Version :9

Sequence 1:NP_524831.2 Gene:nompA / 45587 FlyBaseID:FBgn0016047 Length:1557 Species:Drosophila melanogaster
Sequence 2:NP_741299.2 Gene:cutl-26 / 176896 WormBaseID:WBGene00021950 Length:502 Species:Caenorhabditis elegans


Alignment Length:554 Identity:115/554 - (20%)
Similarity:196/554 - (35%) Gaps:130/554 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1021 DVTQTCNEEGMEFTIRTPEGFLGRIYTYGF-YDRCFFRGNGGTVNVLRLSGPQGYPDCGTQRYGD 1084
            ||..:|:|:.:...|||.:.|.|.:.|... .:.|..:|.|..|.||:|:...  .:||.:....
 Worm    28 DVRWSCSEDVVSVFIRTSKPFEGLVQTRSSESEACRVQGFGTNVAVLKLNLKS--DECGIKYDVA 90

  Fly  1085 TLTNIVVVQFSDN--VQTSRDKRYNLTCIFRGPGEAVVSSGYIGAGSGSPIPIEYLPAENTLSSK 1147
            :.|..|.|....:  :....||..|:||       ..:::|          ...|.....:.||.
 Worm    91 SKTYSVTVDVHSHPVLIVEGDKSVNVTC-------REIANG----------TQHYASQMTSQSSD 138

  Fly  1148 VRLSILYQGRPTTTIAVGDPLTFRLE-----AQDGYNHVTDIFATNVVARDPYSGR-SIQLIDRF 1206
            .:|.:|....|..|:....|.|.::.     .|:.|:    .|....:|: |..|. ::||.|..
 Worm   139 YQLRVLSSRLPVDTVKYSQPYTLQIRPLPSTQQNSYS----FFVGQCIAQ-PVGGNVTVQLTDPV 198

  Fly  1207 GCPVDPFVFPELDKLRDGDTLEARFNAFKIPESNFLVFEATVRSCREGCQPAYCPGPAGRQEPSF 1271
            ||.:...:.....:....:..|.. :.|:.|.:..|.....|..|...|:...|.     |:.| 
 Worm   199 GCALFKSIMGHFARRESVEEAEIP-SMFRFPNAKQLKISCIVTECDGSCEARTCD-----QDSS- 256

  Fly  1272 GRRRRSLNTTEIPEPEALALEGSSQLEASTLDEVTVVNSTTVSATLGQVPLNETQLGEKTKETEE 1336
                          ..:|....::..|:.....|:::           |.|.|..|....:..:|
 Worm   257 --------------ASSLLERTTASAESEEFQRVSII-----------VNLEEADLPVLAEAVDE 296

  Fly  1337 PEQVREMIEVFET----------REEIEKESYPRKLVAPVETVCMTPAEYHGLITAIILL---MI 1388
            |..|..:....||          |:||            .:|.|::..|::.|....|.|   .|
 Worm   297 PVMVHHVARDAETPPPNLIVQKSRDEI------------YQTECVSVNEFNLLYYLCIFLAVCSI 349

  Fly  1389 LLFSITLVAGLGYRRYWKSISKNRLVDRHS-PIHSLGHSHSSIRTHERF-TEIG----------H 1441
            :.|::.:|..|..:|  :|..|::   ||| |:..|....||:...:.: ||.|          :
 Worm   350 VGFTMNIVLALMLKR--RSAKKSK---RHSIPVEQLQIPKSSVAPPDFWITENGKEEQEPEPSYY 409

  Fly  1442 MPNLNGGGGGAAAGTGGGANQSASNRASNAFRTNMSMFGGSLHKTFATGNLARMCQLPVINPMRS 1506
            .|.                ..|.|:.||...|..:.:...|.:...|:.|      ....:..||
 Worm   410 APR----------------RDSFSSYASKPNRRVIPITVASEYGVPASRN------SDASSEGRS 452

  Fly  1507 TNQSSHQFEDPSEPIYTDPSLFERSRQVADHSVT 1540
            :|: .:.|..|::...|.|.....:.....||.|
 Worm   453 SNE-IYSFRRPNQIALTRPEARHSNSTFMTHSTT 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompANP_524831.2 PAN_AP_HGF 150..231 CDD:238532
PAN_AP_HGF 244..>303 CDD:238532
PAN_AP_HGF 349..424 CDD:238532
PAN_AP_HGF 914..1011 CDD:238532
ZP 1025..1264 CDD:214579 54/247 (22%)
cutl-26NP_741299.2 Zona_pellucida 33..252 CDD:391783 53/243 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.