DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompA and cut-1

DIOPT Version :10

Sequence 1:NP_524831.2 Gene:nompA / 45587 FlyBaseID:FBgn0016047 Length:1557 Species:Drosophila melanogaster
Sequence 2:NP_496410.1 Gene:cut-1 / 174720 WormBaseID:WBGene00000851 Length:424 Species:Caenorhabditis elegans


Alignment Length:426 Identity:88/426 - (20%)
Similarity:154/426 - (36%) Gaps:102/426 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1013 GRSDGECMDVTQTCNEEGMEFTIRTPEGFLGRIYTYGFYDRCFFRGNGGTVNVLRLSGPQGYPDC 1077
            |..:.||...:.|.|     |..|.|  |.|.:|..|.||:...|.:.|...|..:..|  :..|
 Worm    27 GEPEVECGPNSITVN-----FNTRNP--FEGHVYVKGLYDQAGCRSDEGGRQVAGIELP--FDSC 82

  Fly  1078 GTQR------YGDTLTNIVVVQFSDNVQTSRDKRYNLTCIFRGPGEAVVSSGYIGAGSGSPIPIE 1136
            .|.|      .|..::..||:.|.....|..|:.|.:.|.                         
 Worm    83 NTARTRSLNPKGVFVSTTVVISFHPQFVTKVDRAYRIQCF------------------------- 122

  Fly  1137 YLPAENTLSSKVRLSILYQGRPTTTIAV-------------GDPLTFRLEAQDGY------NHVT 1182
            |:.::.|:|:::.:|.|.....|..:.:             |.|:.|....|..|      :..|
 Worm   123 YMESDKTVSTQIEVSDLTTAFQTQVVPMPVCKYEILDGGPSGQPIQFATIGQQVYHKWTCDSETT 187

  Fly  1183 DIFATNV--VARDPYSGRSIQLIDRFGCPVDPFVFPELD---KLRDGDTLEARFNAFKIPESNFL 1242
            |.|...|  ...|..:|.::|:::..||.:|.|:...|:   .|..|.  ||  :.:|..:.:.|
 Worm   188 DTFCAVVHSCTVDDGNGDTVQILNEEGCALDKFLLNNLEYPTDLMAGQ--EA--HVYKYADRSQL 248

  Fly  1243 VFEA----TVRSCREGCQPAYCPGPAG----RQEPSFGRRRRSLNTTEIPEPEALALEGSSQLEA 1299
            .::.    |::.....|....|..|.|    :|..:.|....:.....:.|.:|..:..::.:.|
 Worm   249 FYQCQISITIKDPGSECARPTCSEPQGFGAVKQAGAGGAHAAAAPQAGVEEVQAAPVAAAAPVAA 313

  Fly  1300 STLDEVTVVNSTTVSATLGQVPLNETQLGEKTKETEEPE---QVREMIEVFETREE--------- 1352
            .       |.:...:..:.:..|.:.:|..|.:...|.|   .||..|...:..|.         
 Worm   314 P-------VAAAAAAPAVPRATLAQLRLLRKKRSFGENEGILDVRVEINTLDIMEGASPSAPEAA 371

  Fly  1353 --IEKESYPRKLVAPVETVCMTP---AEYHGLITAI 1383
              :.:||..|:  |....:|:||   |.:.|:.|.:
 Worm   372 ALVSEESVRRR--ATSTGICLTPIGFASFLGIGTIV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompANP_524831.2 PAN_AP_HGF 150..231 CDD:238532
PAN_AP_HGF 244..>303 CDD:238532
PAN_AP_HGF 349..424 CDD:238532
PHA03247 <579..907 CDD:223021
PAN_AP_HGF 914..1011 CDD:238532
ZP 1025..1264 CDD:214579 58/272 (21%)
cut-1NP_496410.1 ZP 32..271 CDD:214579 59/276 (21%)
Blue background indicates that the domain is not in the aligned region.

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