DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Faa and fahd2a

DIOPT Version :9

Sequence 1:NP_524830.2 Gene:Faa / 45577 FlyBaseID:FBgn0016013 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001184157.1 Gene:fahd2a / 734144 XenbaseID:XB-GENE-964031 Length:319 Species:Xenopus tropicalis


Alignment Length:361 Identity:90/361 - (24%)
Similarity:132/361 - (36%) Gaps:126/361 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PLENLPYAVFSTENNKVHRICVAI--GEHVLDLKAVSQLFPFQVQKSLQAETLNELMGLDFEAWD 77
            |..|:....|....::..:|.:.:  |.:|:||.|.....|.::::.|                :
 Frog    28 PALNMRLVQFQNSGSQNPKIGLELQDGGNVIDLNAYDPSLPCRMREFL----------------E 76

  Fly    78 VVRSQTQKLLTKGSELDHNVDLKAVSIVPQSEIKLHLPAQ-------IG-DYTDFYSSIHHATNV 134
            :..|..|  :.|.: ||.|     ..|:.:|||.|..|..       || :|.|      |... 
 Frog    77 IGESALQ--IAKRA-LDSN-----QHILSRSEISLLAPISNPEKIICIGMNYVD------HCLE- 126

  Fly   135 GIMFRGPDNALMPNWRHLPVGYHGRASSVVVSGTPIRRPLGQTFPDGAEKPVFGACKLLDFELEM 199
                   .|..:|.   .|:.:...|||:|....|||.|        ||.      |.:|:|:|:
 Frog   127 -------QNVPVPK---EPIIFSKFASSIVGPSDPIRIP--------AES------KEVDWEVEL 167

  Fly   200 AFFIGGKGNQLGEPIRVDEAWKNVFGFTLMNDWSARDIQ------KW-------EYVPLGPFTAK 251
            ||.||.||..:.|    ::|..:|.|||:.:|.||||.|      :|       .:.|||     
 Frog   168 AFVIGKKGRNIKE----EDAMDHVVGFTVAHDVSARDWQMNKNGKQWLLGKTFDTFCPLG----- 223

  Fly   252 NLGTTISPWVVPTAALKPFVLDNFPQEPEVLPYLRQNIPFNFDINLEVSLKPADQNEALISKSNF 316
                       |....|..:.|                |.|..|...|       ||.|:..||.
 Frog   224 -----------PALVTKDAISD----------------PHNLGIRCRV-------NEDLVQNSNT 254

  Fly   317 KHLYWTPLQQIAHHT--VTGCNLRPGDLMASGTISG 350
            ..:.:.....||..:  ||   |.|||:..:||..|
 Frog   255 NQMVFKTEALIAWASKFVT---LNPGDIFLTGTPPG 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FaaNP_524830.2 PLN02856 1..414 CDD:215461 90/361 (25%)
FAA_hydrolase_N 17..115 CDD:286391 21/99 (21%)
FAA_hydrolase 121..409 CDD:279845 65/245 (27%)
fahd2aNP_001184157.1 HpaG-C-term 88..319 CDD:131356 76/283 (27%)
FAA_hydrolase 114..318 CDD:279845 67/251 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.