DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Faa and fahd1

DIOPT Version :9

Sequence 1:	NP_524830.2	Gene:	Faa / 45577	FlyBaseID:	FBgn0016013	Length:	417	Species:	Drosophila melanogaster
Sequence 2:	NP_001018564.1	Gene:	fahd1 / 553762	ZFINID:	ZDB-GENE-050522-448	Length:	219	Species:	Danio rerio

Alignment Length:	198	Identity:	47/198 - (23%)
Similarity:	76/198 - (38%)	Gaps:	44/198 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   153 PVGYHGRASSVVVSGTPIRRPLGQTFPDGAEKPVFGACKLLDFELEMAFFIGGKGNQLGEPIRVD 217
            ||.:....|:.:..|:||..|...:              .|..|:|:...| |||   |..|...
Zfish    38 PVLFLKPPSAYIKKGSPILVPFYSS--------------NLHHEVELGVVI-GKG---GTAIPQA 84

  Fly   218 EAWKNVFGFTLMNDWSARDIQKWEYVPLGPFTAKNLGTTISPWVVPTAALKPFVLDNFPQEPEVL 282
            .|.::|.|:.|..|.:|||:|.         ..|:.|.   ||.:..|......:.:|      :
Zfish    85 SAMEHVAGYVLCLDMTARDVQD---------ECKSKGL---PWTLAKAFNTSCPISDF------I 131

  Fly   283 PYLRQNIPFNFDINLEVSLKPADQNEALISKSNFKHLYWTPLQQIAHHTVTGCNLRPGDLMASGT 347
            |  ::.||....|||.:.:....:.....|:..|...|      :.::.....:|..|||:.:||
Zfish   132 P--KEKIPDPGSINLWLKVNNVQKQNGSTSQMIFSIPY------LINYISEIISLEEGDLILTGT 188

  Fly   348 ISG 350
            ..|
Zfish   189 PKG 191

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Faa	NP_524830.2	PLN02856	1..414	CDD:215461	47/198 (24%)
		FAA_hydrolase_N	17..115	CDD:286391
		FAA_hydrolase	121..409	CDD:279845	47/198 (24%)
fahd1	NP_001018564.1	MhpD	<14..206	CDD:223257	47/198 (24%)
fahd1	NP_001018564.1	FAA_hydrolase	17..209	CDD:279845	47/198 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0179
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810