DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Faa and fahd2a

DIOPT Version :9

Sequence 1:NP_524830.2 Gene:Faa / 45577 FlyBaseID:FBgn0016013 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_021333901.1 Gene:fahd2a / 405854 ZFINID:ZDB-GENE-040426-2499 Length:346 Species:Danio rerio


Alignment Length:397 Identity:88/397 - (22%)
Similarity:141/397 - (35%) Gaps:157/397 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQSFVPVPENSDFPLENLPYAVFSTENNK----------VHRICVAI---------GEHVLDLK 46
            |:..|:.||:   ..|..| .||||..:.:          .|::...|         |:.::|||
Zfish     1 MTMRFLAVPQ---LTLRRL-NAVFSAGSVRRFGRMRLVQFCHKVAEGIVRVGVEQDEGQGIVDLK 61

  Fly    47 AVSQLFPFQVQKSLQAETLNELMGLDFEAWDVVRSQTQKLLTKGSELDHNVDLKAVSIVPQSEIK 111
            |.....|         .|:.|.:.|..:..|..:    :.|:.|.           :::|:|:|:
Zfish    62 AFDPSMP---------STMREFLELGPKGMDCAK----RALSSGQ-----------NVLPRSDIR 102

  Fly   112 LHLPAQIGDYTDFYSSIHHATN------VGIMFRG---PDNALMPN----WRHLPVGYHGRASSV 163
            |..|               .||      ||:.::.   ..||.:|.    :...|....|....:
Zfish   103 LLSP---------------VTNPEKVVCVGMNYKDHCLEQNAPIPKEPIIFSKFPCSITGPNDDI 152

  Fly   164 VVSGTPIRRPLGQTFPDGAEKPVFGACKLLDFELEMAFFIGGKGNQLGEPIRVDEAWKNVFGFTL 228
            ::             ||.:::        :|:|:|:||.||.||..:.|    :||...:.|||:
Zfish   153 IL-------------PDESQE--------VDWEVELAFVIGRKGKHIKE----EEALSYIAGFTV 192

  Fly   229 MNDWSARDIQ------KW-------EYVPLGPFTAKNLGTTISPWVVPTAALKPFVLDNFPQEPE 280
            .||.||||.|      :|       .:.||||    .|.||.|...|....::.||         
Zfish   193 ANDVSARDWQMKRNGKQWLLGKTFDTFCPLGP----ALVTTDSLKDVHKLGIRCFV--------- 244

  Fly   281 VLPYLRQNIPFNFDINLEVSLKPADQNEALISKSNFKHLYWTPLQQIA--HHTVTGCNLRPGDLM 343
                                      |.|.:.:||...:.:...:.:|  ...||   |.|||:.
Zfish   245 --------------------------NGATVQESNTNQMIFQTEKVVAWVSQFVT---LYPGDVF 280

  Fly   344 ASGTISG 350
            .:||..|
Zfish   281 LTGTPPG 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FaaNP_524830.2 PLN02856 1..414 CDD:215461 88/397 (22%)
FAA_hydrolase_N 17..115 CDD:286391 23/116 (20%)
FAA_hydrolase 121..409 CDD:279845 59/258 (23%)
fahd2aXP_021333901.1 MhpD 53..300 CDD:223257 76/341 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.