DRSC/TRiP Functional Genomics Resources

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Protein Alignment Faa and fahd2a

DIOPT Version :10

Sequence 1:NP_524830.2 Gene:Faa / 45577 FlyBaseID:FBgn0016013 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_021333901.1 Gene:fahd2a / 405854 ZFINID:ZDB-GENE-040426-2499 Length:346 Species:Danio rerio


Alignment Length:397 Identity:88/397 - (22%)
Similarity:141/397 - (35%) Gaps:157/397 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQSFVPVPENSDFPLENLPYAVFSTENNK----------VHRICVAI---------GEHVLDLK 46
            |:..|:.||:   ..|..| .||||..:.:          .|::...|         |:.::|||
Zfish     1 MTMRFLAVPQ---LTLRRL-NAVFSAGSVRRFGRMRLVQFCHKVAEGIVRVGVEQDEGQGIVDLK 61

  Fly    47 AVSQLFPFQVQKSLQAETLNELMGLDFEAWDVVRSQTQKLLTKGSELDHNVDLKAVSIVPQSEIK 111
            |.....|         .|:.|.:.|..:..|..:    :.|:.|.           :::|:|:|:
Zfish    62 AFDPSMP---------STMREFLELGPKGMDCAK----RALSSGQ-----------NVLPRSDIR 102

  Fly   112 LHLPAQIGDYTDFYSSIHHATN------VGIMFRG---PDNALMPN----WRHLPVGYHGRASSV 163
            |..|               .||      ||:.::.   ..||.:|.    :...|....|....:
Zfish   103 LLSP---------------VTNPEKVVCVGMNYKDHCLEQNAPIPKEPIIFSKFPCSITGPNDDI 152

  Fly   164 VVSGTPIRRPLGQTFPDGAEKPVFGACKLLDFELEMAFFIGGKGNQLGEPIRVDEAWKNVFGFTL 228
            ::             ||.:::        :|:|:|:||.||.||..:.|    :||...:.|||:
Zfish   153 IL-------------PDESQE--------VDWEVELAFVIGRKGKHIKE----EEALSYIAGFTV 192

  Fly   229 MNDWSARDIQ------KW-------EYVPLGPFTAKNLGTTISPWVVPTAALKPFVLDNFPQEPE 280
            .||.||||.|      :|       .:.||||    .|.||.|...|....::.||         
Zfish   193 ANDVSARDWQMKRNGKQWLLGKTFDTFCPLGP----ALVTTDSLKDVHKLGIRCFV--------- 244

  Fly   281 VLPYLRQNIPFNFDINLEVSLKPADQNEALISKSNFKHLYWTPLQQIA--HHTVTGCNLRPGDLM 343
                                      |.|.:.:||...:.:...:.:|  ...||   |.|||:.
Zfish   245 --------------------------NGATVQESNTNQMIFQTEKVVAWVSQFVT---LYPGDVF 280

  Fly   344 ASGTISG 350
            .:||..|
Zfish   281 LTGTPPG 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FaaNP_524830.2 PLN02856 1..414 CDD:215461 88/397 (22%)
fahd2aXP_021333901.1 YcgM 106..290 CDD:439949 60/264 (23%)

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