DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Faa and fah

DIOPT Version :9

Sequence 1:NP_524830.2 Gene:Faa / 45577 FlyBaseID:FBgn0016013 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001107523.1 Gene:fah / 100135385 XenbaseID:XB-GENE-964392 Length:420 Species:Xenopus tropicalis


Alignment Length:419 Identity:256/419 - (61%)
Similarity:301/419 - (71%) Gaps:9/419 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SFVPVPENSDFPLENLPYAVFSTENNKVHRICVAIGEHVLDLKAVSQLF--PF--QVQKSLQAET 64
            ||:.|..|||||::||||.||||::...|||.||||:.:|||..:..||  ||  ..|.......
 Frog     2 SFIQVEANSDFPIQNLPYGVFSTQDEPRHRIGVAIGDQILDLSVIKHLFTGPFISGNQDVFNQPV 66

  Fly    65 LNELMGLDFEAWDVVRSQTQKLLTKGSE--LDHNVDLKAVSIVPQSEIKLHLPAQIGDYTDFYSS 127
            ||..|.|...||..||...||||: .||  |..|.:|::.:.|.|::..|||||.||||||||||
 Frog    67 LNNFMSLGPNAWREVRQFLQKLLS-ASEPLLRDNAELRSRAFVSQAKATLHLPANIGDYTDFYSS 130

  Fly   128 IHHATNVGIMFRGPDNALMPNWRHLPVGYHGRASSVVVSGTPIRRPLGQTFPDGAEKPVFGACKL 192
            ..|||||||||||.||||||||.|||||||||||||||||||:|||:||..|:..:.|.|.|.||
 Frog   131 RDHATNVGIMFRGKDNALMPNWLHLPVGYHGRASSVVVSGTPVRRPMGQVRPNDDKPPEFEASKL 195

  Fly   193 LDFELEMAFFIGGKGNQLGEPIRVDEAWKNVFGFTLMNDWSARDIQKWEYVPLGPFTAKNLGTTI 257
            ||.|||||||: |.||.||:||.:.:|.:::||..|||||||||||||||||||||.:||..|||
 Frog   196 LDIELEMAFFV-GPGNPLGKPIPIHKADEHIFGMVLMNDWSARDIQKWEYVPLGPFLSKNFSTTI 259

  Fly   258 SPWVVPTAALKPFVLDNFPQEPEVLPYLRQNIPFNFDINLEVSLK-PADQNEALISKSNFKHLYW 321
            ||||||..||.||||.|..|:|..|||||.|..:.|||||.|.|: ...:|...|.|||||::||
 Frog   260 SPWVVPMEALMPFVLPNTVQDPLPLPYLRDNTNYTFDINLCVCLQGKGMKNPVSICKSNFKYMYW 324

  Fly   322 TPLQQIAHHTVTGCNLRPGDLMASGTISGETPDSYGSLLELCWKGTKTLELPGGKTRKFLQDFDE 386
            |..||:|||||||||:|||||:|||||||..|.|:||:|||.|:|||.::|..|..|.||||.|.
 Frog   325 TMKQQLAHHTVTGCNVRPGDLLASGTISGPDPGSFGSMLELSWRGTKPIDLGDGHKRTFLQDGDT 389

  Fly   387 VIIRGHCEKNGLRIGFGECVGQVLPAHPV 415
            |||.|:|:..|.|:|||.|.|.||||.|:
 Frog   390 VIIEGYCQGEGYRVGFGTCTGTVLPAVPL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FaaNP_524830.2 PLN02856 1..414 CDD:215461 255/416 (61%)
FAA_hydrolase_N 17..115 CDD:286391 44/103 (43%)
FAA_hydrolase 121..409 CDD:279845 193/288 (67%)
fahNP_001107523.1 fum_ac_acetase 2..416 CDD:162276 254/415 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 388 1.000 Domainoid score I795
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H110
Inparanoid 1 1.050 485 1.000 Inparanoid score I1412
OMA 1 1.010 - - QHG63168
OrthoDB 1 1.010 - - D325183at33208
OrthoFinder 1 1.000 - - FOG0006626
OrthoInspector 1 1.000 - - oto103245
Panther 1 1.100 - - LDO PTHR43069
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4146
SonicParanoid 1 1.000 - - X4862
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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