DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6a17 and Cyp4a8

DIOPT Version :9

Sequence 1:NP_001286433.1 Gene:Cyp6a17 / 45556 FlyBaseID:FBgn0015714 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_038965258.1 Gene:Cyp4a8 / 266674 RGDID:628846 Length:510 Species:Rattus norvegicus


Alignment Length:529 Identity:132/529 - (24%)
Similarity:235/529 - (44%) Gaps:69/529 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLLALIVVILSLLVFAAR-RRHGYWQRRG---IPHDEVHPLFGNIKDWPNKRHIAEIFRDYYFKY 62
            |.:|.::.:|.||...|: ..|..|..|.   .|....|..||:...:    .:.:.|:|...:.
  Rat    19 LQIATVLTVLLLLFKTAQFYLHRRWLLRATQQFPSPPSHWFFGHKLSF----LVDQEFQDILTRV 79

  Fly    63 KNSDYPFAGFFFFFTRTAVVTDMELLKRVLIKD--FNHFENRGVFYNEIDDPLSATLFSIEGQKW 125
            ||.......:.:.......|.|.:.:|.:|.:.  .:|..     |..:...:...|..:.||.|
  Rat    80 KNFPSACPQWLWGSNVRIQVYDPDYMKLILGRSDPKSHHS-----YRFLAPWIGYGLLLLNGQTW 139

  Fly   126 RHLRHKLTPTFTSGKMKNMFPIVVKVGEEMDKVFRSKTAADRGQ--VLEVVDLVARYTADVIGNC 188
            ...|..|||.|....:|   |.|..:.:.: ::...|.....||  .||:...:...|.|.|..|
  Rat   140 FQHRRMLTPAFHYDTLK---PYVGIMADSV-RIMLDKWEQIVGQDSTLEIFQHITLMTLDTIMKC 200

  Fly   189 AFGLNCNSLYDPKAEFVSIGKRAITEHRYGNMLDIF-----LFGFPKLSRRLR------------ 236
            ||....:...|.|.:........:....:..:.:||     ::......|:.|            
  Rat   201 AFSQEGSVQLDRKYKSYIKAVEDLNNLSFFRIRNIFHQNDIIYSLSSNGRKARSAWQLAHEHTDQ 265

  Fly   237 ----LKLNIQEAEDFYTKIVRETIDYRLRTKEKRN-DFMDSLIEMYKNEQSGNSEDGLTFNELLA 296
                .|..:|:.|:..            :.|:||. ||:|.|  ::...::|:|   |:..:|.|
  Rat   266 VIKSRKAQLQDEEELQ------------KVKQKRRLDFLDIL--LFARIENGSS---LSDKDLRA 313

  Fly   297 QAFIFFVAGFETSSTTMGFALYELARNQDVQDKLREEIGNVFGKHNKEFTYEGIKEMKYLEQVVM 361
            :...|...|.:|:::.:.:..|.||.|.:.|...|:||.::.| .....|::.:.:|.|....:.
  Rat   314 EVDTFMFEGHDTTASGISWIFYALATNPEHQQGCRKEIQSLLG-DGASITWDDLDKMPYTTMCIK 377

  Fly   362 ETLRKYPVLAHLTRMTDTDFSPEDPKYFIAKGTIVVIPALGIHYDPDIYPEPEIFKPERFTDEEI 426
            |.||.||.:..::||..|..:..|.: .:.||..|::...|:|::|.::|.||:|.|.||..|  
  Rat   378 EALRIYPPVTAVSRMLSTPVTFPDGR-SLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRFAPE-- 439

  Fly   427 AARPSCTWLPFGEGPRNCIGLRFGMMQTCVGLAYLIRGYKFSVSPE-TQIPMKIVVKNILISAEN 490
            ::|.|.::|||..|.|||||.:|.|.:..|.:|..:  .:|.:.|: |:||  |.:..:::.::|
  Rat   440 SSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTL--LRFELLPDPTRIP--IPIPRLVLKSKN 500

  Fly   491 GIHLKVEKL 499
            ||:|:::||
  Rat   501 GIYLRLKKL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a17NP_001286433.1 p450 36..478 CDD:278495 115/468 (25%)
Cyp4a8XP_038965258.1 CYP4B-like 72..505 CDD:410771 116/466 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.