DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4E1 and AT1G29550

DIOPT Version :9

Sequence 1:NP_001261626.1 Gene:eIF4E1 / 45525 FlyBaseID:FBgn0015218 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_174248.1 Gene:AT1G29550 / 839832 AraportID:AT1G29550 Length:240 Species:Arabidopsis thaliana


Alignment Length:241 Identity:82/241 - (34%)
Similarity:125/241 - (51%) Gaps:23/241 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNTATTTAPAGDDAVRTEHLYKHPLMNVW 87
            |:|... |.|.....:..:|.....|...:|....|...:||       .::..|.::    |.|
plant    19 PNTTTS-PSPKEKHVSAIKAISGDEKAPSKEKKNYASKKSTT-------VIQKSHCFQ----NSW 71

  Fly    88 TLWYLENDRSKS----WEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWED 148
            |.|: :|..|||    |......:.:|.|:|:||||||:|.||::...|:|...||..|.|.|||
plant    72 TFWF-DNPSSKSNQVIWGSSLRSLYTFGTIEEFWSLYNNIHPPTKWVSGADLYCFKDKIEPKWED 135

  Fly   149 AANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRGKSNKISIWTADGN 213
            .....||:|.:...|::   |:..||:.||.|:||.||..|:|||||:|.|.:.::||:||.:..
plant   136 PICANGGKWSMMFPKAT---LECNWLNTLLALVGEQFDQGDEICGAVLNFRARGDRISLWTKNAA 197

  Fly   214 NEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYTL 259
            ||||.|.||.:.::.  ||.|.::.:.:|:|..... .:.|..||:
plant   198 NEEAQLSIGKQWKEL--LGYNETIGFIVHEDAKTLD-RDAKRRYTV 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4E1NP_001261626.1 IF4E 82..239 CDD:366742 66/160 (41%)
AT1G29550NP_174248.1 IF4E 67..221 CDD:396291 66/163 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 143 1.000 Domainoid score I1494
eggNOG 1 0.900 - - E1_COG5053
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1633
OMA 1 1.010 - - QHG54586
OrthoDB 1 1.010 - - D1394271at2759
OrthoFinder 1 1.000 - - FOG0000666
OrthoInspector 1 1.000 - - mtm1042
orthoMCL 1 0.900 - - OOG6_100627
Panther 1 1.100 - - O PTHR11960
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X406
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

Return to query results.
Submit another query.