DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4E1 and LSP1

DIOPT Version :9

Sequence 1:NP_001261626.1 Gene:eIF4E1 / 45525 FlyBaseID:FBgn0015218 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001332369.1 Gene:LSP1 / 833534 AraportID:AT5G35620 Length:198 Species:Arabidopsis thaliana


Alignment Length:186 Identity:66/186 - (35%)
Similarity:100/186 - (53%) Gaps:12/186 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PAGDDAVRTE-HLYKHPLMNVWTLWYLENDRSK--SWEDMQNEITSFDTVEDFWSLYNHIKPPSE 128
            ||..:...|| ....|.|...|:.|: :|...|  :|.....:..:||||||||.|:..|...|:
plant    11 PAAAELPATEAEKQPHKLERKWSFWF-DNQSKKGAAWGASLRKAYTFDTVEDFWGLHETIFQTSK 74

  Fly   129 IKLGSDYSLFKKNIRPMWEDAANKQGGR--WVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQI 191
            :...::..|||..:.|.|||.....||:  ||:|.|:  |..||..||:.|:.||||.||.:|:|
plant    75 LTANAEIHLFKAGVEPKWEDPECANGGKWTWVVTANR--KEALDKGWLETLMALIGEQFDEADEI 137

  Fly   192 CGAVINIR--GKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDT 245
            ||.|.::|  .|.:|:|:||...:||...:.||.|.::.|.:  .:.:.:..|.|:
plant   138 CGVVASVRPQSKQDKLSLWTRTKSNEAVLMGIGKKWKEILDV--TDKITFNNHDDS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4E1NP_001261626.1 IF4E 82..239 CDD:366742 59/162 (36%)
LSP1NP_001332369.1 IF4E 27..185 CDD:396291 59/162 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 143 1.000 Domainoid score I1494
eggNOG 1 0.900 - - E1_COG5053
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1633
OMA 1 1.010 - - QHG54586
OrthoDB 1 1.010 - - D1394271at2759
OrthoFinder 1 1.000 - - FOG0000666
OrthoInspector 1 1.000 - - mtm1042
orthoMCL 1 0.900 - - OOG6_100627
Panther 1 1.100 - - O PTHR11960
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X406
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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