DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4E1 and NCBP

DIOPT Version :10

Sequence 1:NP_524829.1 Gene:eIF4E1 / 45525 FlyBaseID:FBgn0015218 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_197312.1 Gene:NCBP / 831929 AraportID:AT5G18110 Length:221 Species:Arabidopsis thaliana


Alignment Length:209 Identity:64/209 - (30%)
Similarity:112/209 - (53%) Gaps:13/209 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 AGNTATTTAPAGDDAVRTEHLYK------HPLMNVWTLWYLEND---RSKSWEDMQNEITSFDTV 113
            :||..:..:....|:|..|...:      |||...:::||....   |::|:||...::..|.||
plant    14 SGNMDSIKSHYVTDSVSEERRSRELKDGDHPLRYKFSIWYTRRTPGVRNQSYEDNIKKMVEFSTV 78

  Fly   114 EDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLL 178
            |.||:.|.|:...|.:...:|...||..|||:|||.||..||:|:|   :.||......|.|:||
plant    79 EGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWII---RFSKVVSARFWEDLLL 140

  Fly   179 CLIGEAFDHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHK 243
            .|:|:..|.:|.|||||:::|...:.||:|..:.::.:|.:.:...::..|:|.....::|:.| 
plant   141 ALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHLKLPHAYVMEYKPH- 204

  Fly   244 DTMVKQGSNVKSIY 257
            |..::..|:.::.:
plant   205 DASLRDNSSYRNTW 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4E1NP_524829.1 IF4E 82..239 CDD:460281 54/159 (34%)
NCBPNP_197312.1 IF4E 44..201 CDD:460281 54/159 (34%)

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