DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p1 and cyp3c4

DIOPT Version :9

Sequence 1:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001071016.1 Gene:cyp3c4 / 558541 ZFINID:ZDB-GENE-060929-96 Length:507 Species:Danio rerio


Alignment Length:556 Identity:153/556 - (27%)
Similarity:241/556 - (43%) Gaps:107/556 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILW-LILALSALLY----WLHRANKDYHILSFFTKRIRLKDGTPVEIIAPIAKGKTIFGNTLDLY 62
            :.| |::.:..||:    |.||         ||     :|.|.|.....|       |..||..|
Zfish     9 VTWTLVVLVITLLFIYGVWPHR---------FF-----IKLGIPGPRPWP-------FVGTLLSY 52

  Fly    63 GRDHAGVFNYSRERAKEMGTSYIEYVFGKAIYNIIDADSAENVLNHPNLITKGLVYNFLHPFLRT 127
            .:   |:.|:..|.||:.|..:..|.....|..:.|.:..:.||      .|....||::...||
Zfish    53 AK---GLCNFDMECAKKYGKVWGIYDGRLPILMVADLEVIKVVL------VKECYSNFINRRKRT 108

  Fly   128 ---------GLLTSTGKKWHARRKMLTPTFHFNILNQFQEIFKTESQKFLLQFEGQD-EVTITLH 182
                     |::....::|...|..|:|.|....|.:...|..|.:.:|:...:.:| |..:.:.
Zfish   109 TGLAGPFSDGIIMVKDERWKRMRSTLSPYFTSGRLKEIFPIAMTHADRFIKNMQKKDPEQPVKIK 173

  Fly   183 DVIPRFTLNSICETAMGVKLDEMAEKGDRYRENFSQIEECFIR-RLSNPLL-------------- 232
            :|:..::|:.|..::..|.:|.:....|.:..|..:    ||: .:.||||              
Zfish   174 EVVAPYSLDVITSSSFSVDIDSINNPEDPFVINVKK----FIQFNMFNPLLLLILLFPSLAIPLK 234

  Fly   233 -WGDKLFEMFAAKDFASALDVV---HRFSSEIIAKRRDLLK--------DELDKSSSTADDDGFV 285
             .|..||...|...|.|.|..:   |...||   .|.|.||        |:..:.|.|::...  
Zfish   235 KMGVTLFSKSAMDFFYSVLKKIKDDHNKESE---GRVDFLKLMLQNQIPDDQIQDSDTSEQPA-- 294

  Fly   286 SKKRFAMLDTLIYAEKDGLIDHIGICEEVDTLMFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEI 350
                            .||.|| .|..:....:..||:|||..|.|.|.|::.|||    |.:::
Zfish   295 ----------------KGLTDH-EILSQSLVFILGGYETTSTTLTFLLYNLATNPD----CLEKL 338

  Fly   351 QEHIDDDL---SNLDVGQLNKLKYLEYFMKETTRLFPSVPIMGREAVQETELANGLILPKGAQIT 412
            .|.||.:.   :.:....|.::.|||..:.|:.||.|:.|.:.|.| ::|.:.|||.:|:|..:.
Zfish   339 VEEIDKNFPLDTPITYDALMRMDYLEMAINESMRLLPTAPRLERSA-KKTVVINGLTIPEGTLVG 402

  Fly   413 IHVFDIHRNAKYWDSPEEFRPERFLPENVQDRHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLL 477
            |..:.:..:...|:||.|||||||.|||..:...||::||..|.|||||.:||:..||..:|.||
Zfish   403 IPTYVLSHDPDIWESPGEFRPERFSPENKSEFLQYAFIPFGLGPRNCIGMRYAVMIMKLFVVKLL 467

  Fly   478 KQFKVLKAIDPQKIVFHTGITLRTQDKIRVKLVRRT 513
            :.|.|....:.| |.....:|.:.:..|.:||:.|:
Zfish   468 QNFSVETCKETQ-IPLEMNVTFQPKVPITLKLIPRS 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 137/494 (28%)
cyp3c4NP_001071016.1 p450 38..485 CDD:278495 137/494 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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