DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p1 and Cyp46a1

DIOPT Version :10

Sequence 1:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001386630.1 Gene:Cyp46a1 / 362782 RGDID:1306605 Length:500 Species:Rattus norvegicus


Alignment Length:543 Identity:113/543 - (20%)
Similarity:222/543 - (40%) Gaps:115/543 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LILALSALLYWLHRANKDY-HI------------LSFFTKRIRLKDGTPVEIIAPIAKGKTIFGN 57
            ::||......::|||...| ||            |.:|.|:.........::....||.   :|.
  Rat    12 VLLAFGLCCTFVHRARSRYEHIPGPPRPSFLLGHLPYFWKKDEACGRVLQDVFLDWAKK---YGP 73

  Fly    58 TLDLYGRDHAGVFNYSRERAKE--MGTSY---------IEYVFGKAIYNIIDADSAENVLNHPNL 111
            .:.:.......|...|.|..|:  |.|.|         |:.|||:.::.                
  Rat    74 VVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRAIQTVFGERLFG---------------- 122

  Fly   112 ITKGLV----YNFLHPFLRTGLLTSTGKKWHARRKMLTPTFH----FNILNQFQEIFKTESQKFL 168
              :|||    |.                :|:.:|:::...|.    .:::..|.|  |.|....:
  Rat   123 --QGLVSECDYG----------------RWYKQRRVMDLAFSRSSLVSLMGTFNE--KAEQLMEI 167

  Fly   169 LQFEGQDEVTITLHDVIPRFTLNSICETAMGVKLDEM--AEKGDRYRENFSQIEECFIRRLSNPL 231
            |:.:...:..:::.|::...|::.:.:.|.|::...:  |:|      ..||..:..:..:|.. 
  Rat   168 LEAKADGQTPVSMQDMLTCATIDILAKAAFGMETSMLLGAQK------PLSQAVKVMLEGISAS- 225

  Fly   232 LWGDKLFEMFAAK-----DFASALDVVHRFSSEIIAKRRDLLKDELDKSSSTADDDGFVSKKRFA 291
              .:.|.:....|     :...::.::.:...:.:.:||:.||...|..:.              
  Rat   226 --RNTLAKFMPGKRKQLREIRESIRLLRQVGKDWVQRRREALKRGEDVPAD-------------- 274

  Fly   292 MLDTLIYAEKDGLIDHIGICEEVDTLMFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHIDD 356
            :|..::.||:....|.: :.:...|....|::|::..|.|.:|.:|..|:    ....:|..:|:
  Rat   275 ILTQILKAEEGAQDDEV-LLDNFVTFFIAGHETSANHLAFTVMELSRQPE----IVARLQAEVDE 334

  Fly   357 DLS---NLDVGQLNKLKYLEYFMKETTRLFPSVPIMGR-EAVQETELANGLILPKGAQITIHVFD 417
            .:.   :||...|.:|:||...:||:.||:|  |..|. ..::|..|.:|:.:|....:....:.
  Rat   335 VVGSKRHLDYEDLGRLQYLSQVLKESLRLYP--PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYV 397

  Fly   418 IHRNAKYWDSPEEFRPERFLPENVQDRHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQFKV 482
            :.|...|::.|..|.|:||.|...:.|.|  |.|||.|.|:|||:::|..|:|.:|..||::.: 
  Rat   398 MGRMDTYFEDPLTFNPDRFGPGAPKPRFT--YFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLE- 459

  Fly   483 LKAIDPQKIVFHTGITLRTQDKI 505
            .:.:..|:.......||:..|.:
  Rat   460 FRLVPGQRFGLQEQATLKPLDPV 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p1NP_524828.1 CYP4 87..507 CDD:410721 91/438 (21%)
Cyp46a1NP_001386630.1 CYP46A1-like 61..484 CDD:410706 102/494 (21%)

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