DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p1 and Cyp4a3

DIOPT Version :9

Sequence 1:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_038965516.1 Gene:Cyp4a3 / 298423 RGDID:631356 Length:511 Species:Rattus norvegicus


Alignment Length:534 Identity:149/534 - (27%)
Similarity:259/534 - (48%) Gaps:75/534 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIILWLILALSALLY----WLHRANKDYHILSFFTKRIRLKDGTPVEIIAPIAKGKTIFGNTLDL 61
            ::.|:|:|..:...|    ||.:|.:.:                      |......::|:  ||
  Rat    24 LLSLFLVLFKAVQFYLRRQWLLKALEKF----------------------PSTPSHWLWGH--DL 64

  Fly    62 YGRDHAGVFNYSRERAKEMGTSYIEYVFG-KAIYNIIDADSAENVLNHPNLITKGLVYNFLHPFL 125
            ..|:...|..:    .::...:.::::.| |....:.|.|..:.||...:....| :|.||.|::
  Rat    65 KDREFQQVLTW----VEKFPGACLQWLSGSKTRVLLYDPDYVKVVLGRSDPKASG-IYQFLAPWI 124

  Fly   126 RT----GLLTSTGKKWHARRKMLTPTFHFNILNQFQEIFKTESQKFLL----QFEGQDEVTITLH 182
            .:    |||...||||....:||||.||:.||..:.:|. .:|...:|    :.:.||......|
  Rat   125 VSGTGYGLLLLNGKKWFQHWRMLTPAFHYGILKPYVKIM-ADSVSIMLDKWEKLDDQDHPLEIFH 188

  Fly   183 DVIPRFTLNSICETAM----GVKLDEMAEKGDRYRENFSQIEECFIRRLSNPLLWGDKLFEMFAA 243
             .:...||:::.:.|.    .|:||..:....:..|:.:.:  .|.|..|  ..:|:.:....::
  Rat   189 -YVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNL--TFFRVRS--AFYGNSIIYNMSS 248

  Fly   244 KDFAS--ALDVVHRFSSEIIAKRRDLL--KDELDKSSSTADDDGFVSKKRFAMLDTLIYAE-KDG 303
            ....|  |..:.|..:..:|..|:..|  ::||.|:.         .|:....||.|::|: :||
  Rat   249 DGRLSRRACQIAHEHTDGVIKMRKAQLQNEEELQKAR---------KKRHLDFLDILLFAKMEDG 304

  Fly   304 --LIDHIGICEEVDTLMFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHIDDDLSNLDVGQL 366
              |.|. .:..||||.||||:|||:.|:.:....::.:|:.||.|.:|:|..:.|..| :....|
  Rat   305 KSLSDE-DLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTS-VTWDHL 367

  Fly   367 NKLKYLEYFMKETTRLFPSVPIMGREAVQETELANGLILPKGAQITIHVFDIHRNAKYWDSPEEF 431
            :::.|....:||..||:|.||.:.||........:|..:|||...||.::.:|.|..||.:|:.|
  Rat   368 DQISYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKVF 432

  Fly   432 RPERFLPENVQDRHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQFKVLKAIDPQKI-VFHT 495
            .|.||.|::  .||::||:|||.|.||||||::||.|:|..:.:.|.:|::|.  ||.:| |...
  Rat   433 DPSRFSPDS--PRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP--DPTRIPVPMA 493

  Fly   496 GITLRTQDKIRVKL 509
            .:.|::::.|.::|
  Rat   494 RLVLKSKNGIHLRL 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 140/475 (29%)
Cyp4a3XP_038965516.1 CYP4B-like 69..506 CDD:410771 136/462 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348499
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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