DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p1 and cyp-13A4

DIOPT Version :9

Sequence 1:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_496111.1 Gene:cyp-13A4 / 188355 WormBaseID:WBGene00011671 Length:520 Species:Caenorhabditis elegans


Alignment Length:528 Identity:126/528 - (23%)
Similarity:218/528 - (41%) Gaps:129/528 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KGKTIFGNTLDLYGRDHAGVFNYSRERAKEMGTSYIEYVFGKAIYNIIDADSAENVLNHPNLITK 114
            :|...||..|..:..::.|:.... |..|:.|          :||.|.:......|:::|..:.:
 Worm    35 RGFPFFGVILKFHDYENPGLLKLG-EWTKKYG----------SIYGITEGVEKTLVVSNPEFVHE 88

  Fly   115 GLVYNF-------LHPF-------LRTGLLTSTGKKWHARRKMLTPTFHFNILNQFQEIFKTESQ 165
            ..|..|       .:|.       .|..|:.:.|.:|...|.:.:|||....|   ::|..|..:
 Worm    89 VFVKQFDNFYGRKTNPIQGDPNKNKRAHLVLAQGHRWKRLRTLASPTFSNKSL---RKIMSTVEE 150

  Fly   166 KFLLQFEGQDEVT-----ITLHDVIPRFTLNSICETAMGVKLDEMAEKGDRYRENFSQIEECFIR 225
            ..:......||.:     :.|.|....|||:.|...|||                  |.|....|
 Worm   151 TVVELMRHLDEASAKGKAVDLLDYYQEFTLDIIGRIAMG------------------QTESLMFR 197

  Fly   226 RLSNPLLWGDKLFEMFAA--------------------------KDFASALDVVHRFSSEI---I 261
               ||:|  .|:.|:|..                          ..|:.|..:::.....:   :
 Worm   198 ---NPML--PKVKEIFKKGGKMPFLIAGVFPIAGTLMRQLFMKFPKFSPAFGIMNTMEKALNKRL 257

  Fly   262 AKRRDLLKDELDKSSSTAD-DDGFVSKKRFAMLD------TLIYAEKDGL-ID-HIGICEEVDTL 317
            .:|....|..::.|....| .|.|:..:  |.:|      ||.:|:.:.| :| |:...|.:..|
 Worm   258 EQRAADKKAGIEPSGEPQDFIDLFLDAR--ANVDFIEEESTLGFAKSEVLKVDKHLTFDEIIGQL 320

  Fly   318 ---MFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHIDDDLSNLDV--GQLNKLKYLEYFMK 377
               :..|||||::.|.:....::.:|:.|    :::||.:|.:..:.:|  .|::||||:|..:|
 Worm   321 FVFLLAGYDTTALSLSYSSYLLATHPEIQ----KKLQEEVDRECPDPEVTFDQISKLKYMECVVK 381

  Fly   378 ETTRLFPSVPIM-GREAVQETELANGLILPKGAQITIHVFDIHRNAKYW-DSPEEFRPERFLPEN 440
            |..|::|...:: .|:.:::|.:. |:.:.:|..:.:..:.:|.:.|.| |...||:|||:   .
 Worm   382 EALRMYPLASLVHNRKCMKKTNVL-GVEIDEGTNVQVDTWTLHYDPKVWGDDASEFKPERW---E 442

  Fly   441 VQDRHTYA---YVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQFKVLKAIDPQKIVFHTGITLRTQ 502
            ..|...||   |:||..|.|.|||.:.||.|.|.|:..:||           |..|.|.    |:
 Worm   443 TGDELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILK-----------KYTFDTS----TE 492

  Fly   503 DKIRVKLV 510
            .:|.:|||
 Worm   493 TEIPLKLV 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 122/521 (23%)
cyp-13A4NP_496111.1 p450 33..514 CDD:278495 126/528 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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