DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p1 and Cyp26a1

DIOPT Version :9

Sequence 1:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus


Alignment Length:498 Identity:119/498 - (23%)
Similarity:202/498 - (40%) Gaps:73/498 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILWLILALSALLYWLHRANKDYHILSFFTKRIRLKDGTPVEIIAPIAKGKTIFGNTLDLYGRDHA 67
            :|.|:|.|:||..|      |.:.:|       .:|.:....:.|...|...||.||.:..:.. 
Mouse    15 VLPLLLFLAALKLW------DLYCVS-------SRDRSCALPLPPGTMGFPFFGETLQMVLQRR- 65

  Fly    68 GVFNYSRERAKEMGTSYIEYVFGKAIYNIIDADSAENVLNHPNLITKGLVYNFLHPFLRTGLLTS 132
               .:.:.:.::.|..|..::||:....::.||:...:|...:.:........:...|..|.|::
Mouse    66 ---KFLQMKRRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPASVRTILGAGCLSN 127

  Fly   133 TGKKWH-ARRKMLTPTFHFNILNQFQEIFKTESQKFLLQFEGQDEVTITLHDVIPRFTLNSICET 196
            .....| .|:|::...|....|..:..:...|....|.|:....|..:.::..:.|.........
Mouse   128 LHDSSHKQRKKVIMQAFSREALQCYVPVIAEEVSSCLEQWLSCGERGLLVYPEVKRLMFRIAMRI 192

  Fly   197 AMGVKLDEMAEKGDRYRENFSQIEECFIRRLSNPLLWGDKLFEMFAAKDFA------SALDVVH- 254
            .:|.   |....|.  .|:..|:.|.|.....|       ||.:.....|:      .|.:::| 
Mouse   193 LLGC---EPGPAGG--GEDEQQLVEAFEEMTRN-------LFSLPIDVPFSGLYRGVKARNLIHA 245

  Fly   255 RFSSEIIAKRRDLLKDELDKSSSTADDDGFVSKKRFAMLDTLIYA--EKDGLIDHIGICEEVDTL 317
            |....|.||.|.|...|.|.....|             |..||..  |:...:|...:.:....|
Mouse   246 RIEENIRAKIRRLQATEPDGGCKDA-------------LQLLIEHSWERGERLDMQALKQSSTEL 297

  Fly   318 MFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHI--------DDDLSNLDVGQLNKLKYLEY 374
            :|.|::||:......:..:.|.|.    ..|:::|.|        .:..:.||:..|.:|||...
Mouse   298 LFGGHETTASAATSLITYLGLYPH----VLQKVREEIKSKGLLCKSNQDNKLDMETLEQLKYTGC 358

  Fly   375 FMKETTRLFPSVPIMGREAVQETELANGLILPKGAQITIHVFDIHRNAKYWDSPEEFRPERFLPE 439
            .:|||.||.|.||...|.|::..|| ||..:|||..:...:.|.|..|..:.:.|||.|:||:..
Mouse   359 VIKETLRLNPPVPGGFRVALKTFEL-NGYQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRFIVP 422

  Fly   440 NVQDRHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQFKV 482
            :.:|...::::||..|.|:|:||::|.        :|||.|.|
Mouse   423 HPEDASRFSFIPFGGGLRSCVGKEFAK--------ILLKIFTV 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 107/447 (24%)
Cyp26a1NP_031837.2 p450 43..491 CDD:299894 109/457 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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