DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p1 and cyp4b1

DIOPT Version :9

Sequence 1:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001120073.1 Gene:cyp4b1 / 100145080 XenbaseID:XB-GENE-5924259 Length:510 Species:Xenopus tropicalis


Alignment Length:548 Identity:148/548 - (27%)
Similarity:248/548 - (45%) Gaps:92/548 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILW-LILALSALLYWLHRANKDY------------------HILSFFTKRIRLKDGTPVEIIA-- 46
            ::| .:.||..||..|.:|.:.|                  |.|.....:|| :||..::::.  
 Frog    14 LVWQQVAALLCLLAVLLKATQLYLSQKRQENIFKQFPGPPRHWLLGNVDQIR-RDGKDLDLLVNW 77

  Fly    47 --------PIAKGKTIFGNTLDLYGRDHAGVFNYSRERAKEMGTSYIEYVFGKAIYNIIDADSAE 103
                    |:..|.  |.:.|.|...|:|.|. :.||..|                         
 Frog    78 THKNGGAFPVWFGN--FSSFLFLTHPDYAKVI-FGREEPK------------------------- 114

  Fly   104 NVLNHPNLITKGLVYNFLHPFLRTGLLTSTGKKWHARRKMLTPTFHFNILNQFQEIFKTESQKFL 168
                      ..:.|:||.|::..|||..||.||...|::|||.||:::|..:..:....:...|
 Frog   115 ----------SSISYDFLVPWIGKGLLVLTGPKWFQHRRLLTPGFHYDVLKPYVNLISKCTTDML 169

  Fly   169 LQFEG--QDEVTITLHDVIPRFTLNSICETAMGVKLDEMAEKGDRYRENFSQIEECFIRRLSNPL 231
            ..:|.  ..:.|:.|...:...||:||.:.|.....:...:..:.|.:....:......||....
 Frog   170 DNWEKLITKQKTVELFQHLSLMTLDSIMKCAFSYDSNCQKDSNNAYIKAVFDLSYVANLRLRCFP 234

  Fly   232 LWGDKLFEMFA-AKDFASALDVVHRFSSEIIAKRRDLLK--DELDKSSSTADDDGFVSKKRFAML 293
            ...|.:|.:.. ...|..|..:.|..:.::|.:|::.:|  .||:|         ...|:....|
 Frog   235 YHNDTVFYLSPHGYRFRKACRITHEHTDKVIQQRKESMKLEKELEK---------IQQKRHLDFL 290

  Fly   294 DTLIYAEKD---GLIDHIGICEEVDTLMFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHID 355
            |.|::|..:   ||.|. .:..||||.||||:|||:.|:.:.|..|:..|:.|:.|.:||:| :.
 Frog   291 DILLFARDEKGHGLSDD-DLRAEVDTFMFEGHDTTASGISWILYCMAKYPEHQQKCREEIKE-VL 353

  Fly   356 DDLSNLDVGQLNKLKYLEYFMKETTRLFPSVPIMGREAVQETELANGLILPKGAQITIHVFDIHR 420
            .|...::...|.|:.|....:||:.|::|.||.:.|:........:|..:|.|..|.:.::.||:
 Frog   354 GDRQIMEWEDLGKIPYTNMCIKESLRMYPPVPGVARQLRNPVTFFDGRSVPAGTLIGLSIYAIHK 418

  Fly   421 NAKYWDSPEEFRPERFLPENVQDRHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQFKVLKA 485
            |...|:.||.|.|.||.|||..:||::|::||:||.|||||:.:||.|||..:.:.|.:|.:...
 Frog   419 NPAVWEDPEVFNPLRFSPENSANRHSHAFLPFAAGPRNCIGQNFAMNEMKVAVALTLNRFHLAPD 483

  Fly   486 ID--PQKIVFHTGITLRTQDKIRVKLVR 511
            ::  |.||   ..:.|::::.|.|.|.:
 Frog   484 LENPPIKI---PQLVLKSKNGIHVHLTK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 131/464 (28%)
cyp4b1NP_001120073.1 p450 50..503 CDD:278495 137/505 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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