DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtd and AT2G05590

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:NP_849938.1 Gene:AT2G05590 / 815108 AraportID:AT2G05590 Length:303 Species:Arabidopsis thaliana


Alignment Length:376 Identity:95/376 - (25%)
Similarity:143/376 - (38%) Gaps:96/376 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   983 MVSMDDK-----PELFISVDKLIPRPARACLDPPLYLRLRMGKPIGKAIPLPTSVMSYGKNKLRA 1042
            |.::.||     ..||.........|..:..|.|   :.|:...:||      |:.||       
plant     1 MHALKDKVSQKLSNLFADSPSQSASPRYSNSDSP---KARLNSSVGK------SLSSY------- 49

  Fly  1043 EYWFSVPKNRVDELYRFINTWVKHLYGELDEE-----QIKARGFELIQEDTEWTKSGTTKAGMGG 1102
             :.|.||::..:|                |.|     .|:...:|.|:.    .||...:|..|.
plant    50 -FSFVVPQSGNEE----------------DSELCPPLPIRTESYECIEN----CKSANGQAKAGT 93

  Fly  1103 GSQDGEEISDLTRESWELIKAPFAKTYKIIKTASHAASHDLEMLGGEVLSMSTDEYRKTSLFATG 1167
            ....||:                               .|.|:.....:..|.::|         
plant    94 FISIGED-------------------------------KDCELRVSAKVEESGNDY--------- 118

  Fly  1168 SFDLDFPIPDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFSTSQHGFALNSLYRKMARLESP 1232
             ||....:.:|...:..:|....|.|.:.||....|..|.|::||.:||.:|.:|.|:...|..|
plant   119 -FDGVKKMRELTESSVFITANLFEFLHASLPNIVRGCKWILLYSTLKHGISLRTLLRRSGELPGP 182

  Fly  1233 VLIVIEDTEHNVFGALTSCSLHVSD--HFYGTGESLLYKF---NPSFKVFHWTGENMYFIKGNME 1292
            .|:|..|.:..|||||..|.|..:.  .:.||.::.|:..   .|  ::|..||.|.|::....|
plant   183 CLLVAGDKQGAVFGALLECPLQPTPKRKYQGTSQTFLFTTIYGEP--RIFRPTGANRYYLMCMNE 245

  Fly  1293 SLSIGAGDGRFGLWLDGDLNQGRSQQCSTYGNEPLAPQEDFVIKTLECWAF 1343
            .|:.|.| |.|.|.||.||.:..|....|:|||.||...:|.:|.:|.|.|
plant   246 FLAFGGG-GNFALCLDEDLLKATSGPSETFGNECLASSTEFELKNVELWGF 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306
LysM 329..371 CDD:279777
TLDc 1182..1344 CDD:214733 59/167 (35%)
AT2G05590NP_849938.1 TLDc 135..296 CDD:214733 59/164 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 87 1.000 Domainoid score I2747
eggNOG 1 0.900 - - E1_COG5142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D767847at2759
OrthoFinder 1 1.000 - - FOG0001020
OrthoInspector 1 1.000 - - otm3059
orthoMCL 1 0.900 - - OOG6_100646
Panther 1 1.100 - - O PTHR23354
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.820

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