DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtd and LOC792958

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:NP_001313526.1 Gene:LOC792958 / 792958 -ID:- Length:255 Species:Danio rerio


Alignment Length:300 Identity:112/300 - (37%)
Similarity:161/300 - (53%) Gaps:50/300 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1046 FSVPKNRVDELYRFINTW-VKHLYGELDEEQIKARGFELIQEDTEWTKSGTTKAGMGGGSQDGEE 1109
            :||  ..||.||.|...| .:::|..  :...|.:.|..:..|..              |..|..
Zfish     5 YSV--GEVDHLYTFFVEWSPENIYSH--KHSRKQQEFLQVHPDAL--------------SVIGSL 51

  Fly  1110 ISDLTRESWELIKAPFAKTYKIIKTASHAASHDLEMLGGEVLSMSTDEYRKTSLFATGSFDLDFP 1174
            :.|...|:|:::.....|                               |:||:.::...:.|..
Zfish    52 LKDSPPENWQIVSVKQQK-------------------------------RRTSVCSSADSESDDL 85

  Fly  1175 IPDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFSTSQHGFALNSLYRKMARLESPVLIVIED 1239
            :|.||..::||.|.|.|:|.||:||||:|..|.|::||:.||.:|.:|||:||.|:.|||:||.|
Zfish    86 LPVLINHSQILKELHLEQLMSHIPARAQGNQWKLVYSTAVHGTSLRTLYRQMAELDRPVLMVIRD 150

  Fly  1240 TEHNVFGALTSCSLHVSDHFYGTGESLLYKFNPSFKVFHWTGENMYFIKGNMESLSIGAGDGRFG 1304
            |:..||||.:|....||.:.|||||:.||.|:|.|:||.|||||.||::|.::||.:|.|.|.||
Zfish   151 TDGQVFGAFSSDPFRVSSYCYGTGETFLYSFSPEFQVFRWTGENSYFVRGFLDSLQMGGGGGPFG 215

  Fly  1305 LWLDGDLNQGRSQQCSTYGNEPLAPQEDFVIKTLECWAFV 1344
            ||||.||.:|.|..|:|:.|.||:...||.::.||.|:||
Zfish   216 LWLDADLYRGSSYSCNTFCNRPLSLHHDFTVQELEVWSFV 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306
LysM 329..371 CDD:279777
TLDc 1182..1344 CDD:214733 85/161 (53%)
LOC792958NP_001313526.1 TLDc 93..255 CDD:214733 85/161 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 170 1.000 Domainoid score I3738
eggNOG 1 0.900 - - E1_COG5142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384247at33208
OrthoFinder 1 1.000 - - FOG0001020
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100646
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R882
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.750

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