DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtd and TBC1D24

DIOPT Version :10

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:NP_001186036.1 Gene:TBC1D24 / 57465 HGNCID:29203 Length:559 Species:Homo sapiens


Alignment Length:533 Identity:109/533 - (20%)
Similarity:196/533 - (36%) Gaps:160/533 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   929 PVPPLTPH-STHSEGHMTYGRSSIGTFIRPHSS-----------------------EGTSSSTKL 969
            |...:||. |.:|:        .:|..:..|||                       ||......|
Human    63 PCRTVTPDASVYSD--------IVGKIVGKHSSSCLPLPEFVDNTQVPSYCLNARGEGAVRKILL 119

  Fly   970 KEAKQAPKLDY----RSMVSM-----DDKPELFISVDKLIPRPARACLDPPLYLRLRMGKPI--G 1023
            ..|.|.|.:.:    .::|::     .|:.|.|....:::     ||.||        |:.:  .
Human   120 CLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRIL-----ACNDP--------GRRLIDQ 171

  Fly  1024 KAIPLPTSVMSYGKNKLRAEYWFSVPKNRV---DELYRFINTWVKHLYGELD-------EEQIKA 1078
            ..:...:|.|::|  .|..:|..:..|..|   :::.:....|.:.|:|||.       .:....
Human   172 SFLAFESSCMTFG--DLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLFGELPLCYFARVFDVFLV 234

  Fly  1079 RGFELIQEDTEWTKSGTTKAGMGGGSQDGEEISDL---------TRESWELIKAPFA------KT 1128
            .|::::............|...|...:......|:         |....:|::..||      |.
Human   235 EGYKVLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKTVSPEKLLEKAFAIRLFSRKE 299

  Fly  1129 YKIIKTASHAASHDLEMLGGEV----LSMSTDEYRKTSLFATGSFDLDFPIPDLIGKTEILTEEH 1189
            .::::.|:..|   |:..|..|    :|:|..::...::.|...            ::||::...
Human   300 IQLLQMANEKA---LKQKGITVKQKSVSLSKRQFVHLAVHAENF------------RSEIVSVRE 349

  Fly  1190 REKLCSHLPARAEGYSWSLIFSTSQHGFALNSLYRKMARLESPVLIVIEDTEHNVFGALTSCSLH 1254
            ...:.|.:|.|.......|:||:.|||::|...|.:....| |.|::|:.|:..|.||..|....
Human   350 MRDIWSWVPERFALCQPLLLFSSLQHGYSLARFYFQCEGHE-PTLLLIKTTQKEVCGAYLSTDWS 413

  Fly  1255 VSDH------FYGTGESLLYKFNPSFKVFHWT--------------------------------- 1280
            ..:.      |:||||..:::..|..:.:.|.                                 
Human   414 ERNKFGGKLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTKPPPLMAAEPTAPLSHSASSDPADR 478

  Fly  1281 ---------------GENMYFIKGNMESLSIGAGDGRFGLWLDGDLNQGRSQQCSTYGNEPLAPQ 1330
                           .|:| |:.|..:.|.:|.|.|: .|::|||||:||:..|.|:.|:||. .
Human   479 LSPFLAARHFNLPSKTESM-FMAGGSDCLIVGGGGGQ-ALYIDGDLNRGRTSHCDTFNNQPLC-S 540

  Fly  1331 EDFVIKTLECWAF 1343
            |:|:|..:|.|.|
Human   541 ENFLIAAVEAWGF 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM <250..371 CDD:440998
TLDc 1182..1344 CDD:214733 56/216 (26%)
TBC1D24NP_001186036.1 RabGAP-TBC 48..253 CDD:459855 37/212 (17%)
TLDc 342..554 CDD:214733 56/216 (26%)
Blue background indicates that the domain is not in the aligned region.

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