DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtd and TBC1D24

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:NP_001186036.1 Gene:TBC1D24 / 57465 HGNCID:29203 Length:559 Species:Homo sapiens


Alignment Length:533 Identity:109/533 - (20%)
Similarity:196/533 - (36%) Gaps:160/533 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   929 PVPPLTPH-STHSEGHMTYGRSSIGTFIRPHSS-----------------------EGTSSSTKL 969
            |...:||. |.:|:        .:|..:..|||                       ||......|
Human    63 PCRTVTPDASVYSD--------IVGKIVGKHSSSCLPLPEFVDNTQVPSYCLNARGEGAVRKILL 119

  Fly   970 KEAKQAPKLDY----RSMVSM-----DDKPELFISVDKLIPRPARACLDPPLYLRLRMGKPI--G 1023
            ..|.|.|.:.:    .::|::     .|:.|.|....:::     ||.||        |:.:  .
Human   120 CLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRIL-----ACNDP--------GRRLIDQ 171

  Fly  1024 KAIPLPTSVMSYGKNKLRAEYWFSVPKNRV---DELYRFINTWVKHLYGELD-------EEQIKA 1078
            ..:...:|.|::|  .|..:|..:..|..|   :::.:....|.:.|:|||.       .:....
Human   172 SFLAFESSCMTFG--DLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLFGELPLCYFARVFDVFLV 234

  Fly  1079 RGFELIQEDTEWTKSGTTKAGMGGGSQDGEEISDL---------TRESWELIKAPFA------KT 1128
            .|::::............|...|...:......|:         |....:|::..||      |.
Human   235 EGYKVLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKTVSPEKLLEKAFAIRLFSRKE 299

  Fly  1129 YKIIKTASHAASHDLEMLGGEV----LSMSTDEYRKTSLFATGSFDLDFPIPDLIGKTEILTEEH 1189
            .::::.|:..|   |:..|..|    :|:|..::...::.|...            ::||::...
Human   300 IQLLQMANEKA---LKQKGITVKQKSVSLSKRQFVHLAVHAENF------------RSEIVSVRE 349

  Fly  1190 REKLCSHLPARAEGYSWSLIFSTSQHGFALNSLYRKMARLESPVLIVIEDTEHNVFGALTSCSLH 1254
            ...:.|.:|.|.......|:||:.|||::|...|.:....| |.|::|:.|:..|.||..|....
Human   350 MRDIWSWVPERFALCQPLLLFSSLQHGYSLARFYFQCEGHE-PTLLLIKTTQKEVCGAYLSTDWS 413

  Fly  1255 VSDH------FYGTGESLLYKFNPSFKVFHWT--------------------------------- 1280
            ..:.      |:||||..:::..|..:.:.|.                                 
Human   414 ERNKFGGKLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTKPPPLMAAEPTAPLSHSASSDPADR 478

  Fly  1281 ---------------GENMYFIKGNMESLSIGAGDGRFGLWLDGDLNQGRSQQCSTYGNEPLAPQ 1330
                           .|:| |:.|..:.|.:|.|.|: .|::|||||:||:..|.|:.|:||. .
Human   479 LSPFLAARHFNLPSKTESM-FMAGGSDCLIVGGGGGQ-ALYIDGDLNRGRTSHCDTFNNQPLC-S 540

  Fly  1331 EDFVIKTLECWAF 1343
            |:|:|..:|.|.|
Human   541 ENFLIAAVEAWGF 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306
LysM 329..371 CDD:279777
TLDc 1182..1344 CDD:214733 56/216 (26%)
TBC1D24NP_001186036.1 RabGAP-TBC 48..253 CDD:366170 37/212 (17%)
Phosphatidylinositol binding. /evidence=ECO:0000250|UniProtKB:Q9VIH7 293..297 0/3 (0%)
TLDc 342..554 CDD:214733 56/216 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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