DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtd and si:ch211-15d5.11

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:XP_005158594.1 Gene:si:ch211-15d5.11 / 559575 ZFINID:ZDB-GENE-131121-177 Length:654 Species:Danio rerio


Alignment Length:1127 Identity:230/1127 - (20%)
Similarity:350/1127 - (31%) Gaps:500/1127 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 PREK-RHSWWNIFVPDNFKNR-SRRASQDVSSLSRSVD-NLAIPVRRSKSRSV-------DHGLA 292
            ||:| |.|::.     |.||| ..:....:|.....:. ..:|....:..|||       .|.:.
Zfish     6 PRDKSRASYFG-----NVKNRLGSKLPAGISQTPGFISAQCSIGAPGAMGRSVGQEGVKGHHHIR 65

  Fly   293 APFDLDSLRSKV--EQRFESVDKLSRQKSSLPTIPTISYTVGNRDTLTSVAARFDTTPSELTHLN 355
            .|    .||...  |..|.:.|         ||:.|::....|.|.|....|...:..:.:..||
Zfish    66 NP----KLRQYYLKEAAFPAKD---------PTMKTLALCTNNGDGLPKKKASTSSPTASVPSLN 117

  Fly   356 RLNSSFIYPGQQLLVPDKSAKDDASSSSTHDADGASLSGKSSPVERKLSGDESREKDILEGLRPG 420
            ....:.:.....|:.|...|:.|                |...||                   .
Zfish   118 PSLDTCVVGTATLVSPSTDAEYD----------------KLMDVE-------------------A 147

  Fly   421 SPKP-GHIERVGGSSQQQQAEEEANKSDDPVITQRFLKINVRHITDGQGVVGGVLLVTPNAVMFD 484
            .|.| |::..:...|:..|.|:.|..|        .||:..|:|||.:|||.|:||||.:.:.||
Zfish   148 VPLPDGNVCLLALPSECSQGEDPAGLS--------CLKLVSRYITDRKGVVSGILLVTSSKIFFD 204

  Fly   485 PNVSDPLVIEHGPESYGVIAPMELVVNAAIFHDIAHMRVAGGAGQGLNSASGDAEKPEIYYPKPV 549
            |..|.|||.|:..|.|.....::.:.:.:.:.||:|                      :|:.|  
Zfish   205 PQKSHPLVQENSCEEYVFSCSVDDLASVSFYTDISH----------------------VYFSK-- 245

  Fly   550 LVEEDSKELPEQQSLLGEDGNKRLDAEIGSLEIADDQESLCSSTGRDGDAFPKAFDRERVEDSSM 614
                                                      :|.|                   
Zfish   246 ------------------------------------------TTHR------------------- 249

  Fly   615 EAKDSAKTDALDDEDKKAGLGLSSTRSTLEERRKSLLDHHWAIPSKDRSSEDEGDNESNVTVDSG 679
              .:|:||..            |.|.|..:....:|.|    ||:                    
Zfish   250 --CNSSKTSK------------SKTHSNKKPHHSALED----IPA-------------------- 276

  Fly   680 ARVQDPHSANSSVSGVPLSQPPVAAAAAAAAVAPASAVVPLPPSGIDLEHLEQLSKQSCYDSGID 744
                            |.|..|.||.:|.|.|.                                
Zfish   277 ----------------PASCDPTAAPSAKAEVE-------------------------------- 293

  Fly   745 IREPVPNVQPIPKKTVYSDADIVLSSDWVPPKTIVPTHFSESPPRSTILGQSLDAGTGGAGGVRK 809
                                                                 |..:|..|.:. 
Zfish   294 -----------------------------------------------------DEESGETGDMA- 304

  Fly   810 KTSSVSFSVDDEAAQQAQAQSAALAVTDKQADKKNKMLKRLSYPLTWVEGLTGEGGAVPPGGVGS 874
                       ||.:|...||..:                |:...|:..|        .|..|..
Zfish   305 -----------EAERQLTLQSGGM----------------LTAAATFCCG--------GPDSVQR 334

  Fly   875 GSLNKSGDTDSAPNTGDSNQSVFSKVFSSSPITLVSELGGNLFSKTPSEDSGGSPVPPLTPHSTH 939
            |: |....:|..     ..||.:.:...:.|.|..|..|.|           ||           
Zfish   335 GN-NPFEHSDKT-----QQQSYWERQLLADPCTSTSNCGIN-----------GS----------- 371

  Fly   940 SEGHMTYGRSSIGTFIRPHSSEGTSSSTKLKEAKQAPKLDYRSMVSMDDKPELFISVDKLIPRPA 1004
                                                                             
Zfish   372 ----------------------------------------------------------------- 371

  Fly  1005 RACLDPPLYLRLRMGKPIGKAIPLPTSVMSYGKNKLRA-EYWFSVPKNRVDELYRFINTWVKH-- 1066
                  .:::|:|.....||.       .::.|:|:.: :.||::.:.|.||||.:::   :|  
Zfish   372 ------LMFVRIRQKLQHGKK-------RAFSKSKIASRDAWFTMQQERSDELYAYLS---QHRP 420

  Fly  1067 ----LYG-ELDEEQIKARGFELIQEDTEWTKSGTTKAGMGGGSQDGEEISDLTRESWELIKAPFA 1126
                |.| |.||.:.....|.|:.|:.:..:..:.:|...|             |.||::.|   
Zfish   421 DLCILEGDEEDEAERDEEDFVLLDEEEQEEEDESPRASHTG-------------EDWEIVSA--- 469

  Fly  1127 KTYKIIKTASHAASHDLEMLGGEVLSMSTDEYRKTSLFATGSFDLDFPIPDLIGKTEILTEEHRE 1191
                                            .:::|.|.||.:.| .:..::.::.||..:..:
Zfish   470 --------------------------------EESALKAPGSTEPD-SLSYILSQSVILDAQQVK 501

  Fly  1192 KLCSHLPARAEGYSWSLIFSTSQHGFALNSLYRKMARLESPVLIVIEDTEHNVFGALTSCSLHVS 1256
            ::...||.|..||:|.|.:||.:||.:|.:||||::..:|||||:|:|....|||:..|..||.|
Zfish   502 EISRELPPRTIGYTWQLSYSTDKHGASLKTLYRKLSATDSPVLILIKDHNQQVFGSFLSHPLHPS 566

  Fly  1257 DHFYGTGESLLYKFNPSFKVFHWTGENMYFIKGNMESLSIGAGDGRFGLWLDGDLNQGRSQQCST 1321
            |.||||||:.|:..:|.||.|.|||||.:||||:::|.:||.|.|.||||:|..|..|||..|.|
Zfish   567 DAFYGTGETFLFLSHPRFKCFKWTGENSFFIKGDLDSFAIGGGSGHFGLWVDERLFLGRSSPCFT 631

  Fly  1322 YGNEPLAPQEDFVIKTLECWAF 1343
            :.|..|:...||.|..||.|.|
Zfish   632 FNNCSLSETNDFTILDLEAWTF 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306 21/109 (19%)
LysM 329..371 CDD:279777 7/41 (17%)
TLDc 1182..1344 CDD:214733 78/162 (48%)
si:ch211-15d5.11XP_005158594.1 TLDc 494..654 CDD:214733 78/160 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384247at33208
OrthoFinder 1 1.000 - - FOG0001020
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2069
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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