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Protein Alignment mtd and Tldc2
DIOPT Version :9
Sequence 1: | NP_001246928.1 |
Gene: | mtd / 45467 |
FlyBaseID: | FBgn0013576 |
Length: | 1344 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038962640.1 |
Gene: | Tldc2 / 502689 |
RGDID: | 1561343 |
Length: | 217 |
Species: | Rattus norvegicus |
Alignment Length: | 124 |
Identity: | 55/124 - (44%) |
Similarity: | 83/124 - (66%) |
Gaps: | 0/124 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1176 PDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFSTSQHGFALNSLYRKMARLESPVLIVIEDT 1240
|.|...:::|.....::|..|||.|..|:.|:|||.||:.||:|..|||:|.....|||:::.|.
Rat 42 PQLTEASQVLGASEIKQLSLHLPPRVTGHPWNLIFCTSRDGFSLQRLYRQMEGHSGPVLLLLRDQ 106
Fly 1241 EHNVFGALTSCSLHVSDHFYGTGESLLYKFNPSFKVFHWTGENMYFIKGNMESLSIGAG 1299
:..:|||.:|.:|.:|..||||||:.|:.|:|..|||.|||.|.:|:||:::||.:|:|
Rat 107 DGQMFGAFSSSALRLSKGFYGTGETFLFSFSPQLKVFKWTGHNSFFVKGDLDSLMMGSG 165
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
mtd | NP_001246928.1 |
LysM |
271..371 |
CDD:224306 |
|
LysM |
329..371 |
CDD:279777 |
|
TLDc |
1182..1344 |
CDD:214733 |
53/118 (45%) |
Tldc2 | XP_038962640.1 |
TLDc |
48..>165 |
CDD:214733 |
52/116 (45%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166335615 |
Domainoid |
1 |
1.000 |
168 |
1.000 |
Domainoid score |
I3722 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5142 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D384247at33208 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001020 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100646 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 7.650 |
|
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