DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtd and Ncoa7

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:XP_038955206.1 Gene:Ncoa7 / 498995 RGDID:1566426 Length:977 Species:Rattus norvegicus


Alignment Length:1229 Identity:356/1229 - (28%)
Similarity:540/1229 - (43%) Gaps:312/1229 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 QTKLDRHRRKKMEYSNQRSL-DSGMMCSESHSDLTNDSLAEGSGSFANRSR-------------- 219
            :.|.:...||:..::..:.| ......:||:.   |.|..|.:.||.:|||              
  Rat     5 EEKKEPKERKQSYFARYKYLIIQNTAATESNQ---NRSPLEHAKSFPSRSRLKKKKQAKQNAEIV 66

  Fly   220 ------NGNDDEDDIIDPSHGEYFPREKRHSWWNIFVPDNFKNRSRRASQDVSSLSRSVDNLAIP 278
                  :|.||       ||.....::|             .|.:....|......:..:|....
  Rat    67 SAARSHSGKDD-------SHSVILEQDK-------------SNIAAEGDQSTDEKKKRKNNQLKE 111

  Fly   279 VRRSKSRSVDHGLAAPFDLDSLRSKVEQRFESVDKLSRQKSSLPTIPTISYTVGNRDTLTSVAAR 343
            :||.:       |...::.|..:||...:.|.  |:..||..    .|:.||.|::|||.|||.:
  Rat   112 IRRME-------LKRYYNADDNQSKSHDKKEK--KMVVQKPQ----GTLEYTAGSQDTLNSVALK 163

  Fly   344 FDTTPSELTHLNRLNSSFIYPGQQLLVPDKSAKDDA--SSSSTHDADGASLSGKSSPVERKLSGD 406
            |:.||:.|..||:|.:..|.|||.|.|||.:.....  .||||   .||::|..||..|.    |
  Rat   164 FNVTPNRLVELNKLFTHTIVPGQVLFVPDANIPSSTLRLSSST---PGATVSPSSSDAEY----D 221

  Fly   407 ESREKDIL-EGLRPGSPKPGHIERVGGSSQQQQAEEEANKSDDPVITQRFLKINVRHITDGQGVV 470
            :..:.|:. :.|:|       ||||..|:.::         |:|.:. :|||:|.|:.|||:|||
  Rat   222 KLPDADLARKALKP-------IERVLSSTSEE---------DEPGVV-KFLKMNCRYFTDGKGVV 269

  Fly   471 GGVLLVTPNAVMFDPNVSDPLVIEHGPESYGVIAPMELVVNAAIFHDIAHMRVAGGAGQGLNSAS 535
            |||::||||.:||||:.|||||||:|.|.||:|.|||.||:.|:::||:||::.           
  Rat   270 GGVMIVTPNNIMFDPHKSDPLVIENGCEEYGLICPMEEVVSIALYNDISHMKIK----------- 323

  Fly   536 GDAEKPEIYYPKPVLVEEDSKELPEQQSLLGEDGNKRLDAEIGSLEIADDQESLCSSTGRDGDAF 600
             ||                   ||..           |..::..|....:.|.|.|.  :|.:.|
  Rat   324 -DA-------------------LPSD-----------LPRDVCPLYRPGEWEDLASE--KDINPF 355

  Fly   601 P--KAFDRERVEDSSMEAKDSAKTDALDDEDKKAGLGLSSTRSTLEERRKSLLDHHWAIPSKDRS 663
            .  |:.::|:      ..::..:|.|||  .|..|....||     ||.::             .
  Rat   356 SKFKSINKEK------RQQNGERTLALD--VKSVGSPEEST-----ERMRT-------------R 394

  Fly   664 SEDEGDNES----NVTVDSGARVQDPHSANSSVSGVPLSQPPVAAAAAAAAVAPASAVVPLPPSG 724
            :|...|:||    |:....|...:.|       |...||:.|.:..||....|..:.::    ..
  Rat   395 TEPPDDSESWKLKNLEYSRGTASEFP-------SVTQLSKGPSSVCAALEPTAKENRLL----GD 448

  Fly   725 IDLEHLEQLSKQSCYDSGIDIREPVPNVQPIPKKTVYSDADIVLSSDWVPPKTIVPTHFSESPPR 789
            .|...||:||.|.  .||:|..:......|..:|   .||          |:||:.....|....
  Rat   449 EDFVDLEELSSQP--GSGMDKGDARKECLPYDQK---KDA----------PQTIMSAKKGEEQSA 498

  Fly   790 STILGQSLDAGTGGA----GGVRKKTSSVSFSVDDEAAQQAQAQSAALAVTDKQADK-------- 842
            ..:.|...||...||    .|.::..:.   .||.::......:.:.|:: .:..||        
  Rat   499 PDVTGTESDAELKGALDSETGEKQDEAP---EVDKQSGSPENWRESTLSI-HEDLDKVKLIEFYL 559

  Fly   843 -KNKMLKRLSYPLTWVEGLTGEGGAVPPGGVG---SGSLNKSGDTDSAPNTGDSNQSVFSKVFSS 903
             |||...:||..:  ::....|..::.|.|:.   |.||.::|  ||.|.:            ..
  Rat   560 NKNKEGSQLSENV--LKSELSERKSIEPDGIDITLSSSLPQAG--DSPPES------------HK 608

  Fly   904 SPITLVSELGGNLFSKTPSEDSGGSPVPPLTPHSTHSEGHMTYGRSSIGTFIRPHSSEGTSSSTK 968
            .|.||..:             .||:|.|.|.|   .:|..:|..:.::           .|..:.
  Rat   609 EPGTLCVK-------------GGGTPPPKLHP---SAEETVTNNKEAL-----------DSLESS 646

  Fly   969 LKEAKQAPKLDYRSMVSMDDKPELFISVDKLIPRPARACLDPPLYLRLRMGKPIGK--AIPLPTS 1031
            |.:..|..::|.||.:.:.....:.:.::.::|........||::|.:::|||:.|  |....|.
  Rat   647 LDKLCQGAQMDNRSEIQLWLLKRIQVPIEDILPSKEEKSKTPPMFLCIKVGKPMRKSFASHSTTM 711

  Fly  1032 VMSYGKNKLRAEYWFSVPKNRVDELYRFINTWVKHLYGELDEEQIKARGFELIQEDTEWTKSGTT 1096
            |..|||.:.:.||||:||:.|||.||.|...|...:||:..:||    ||.::::          
  Rat   712 VQQYGKRRKQPEYWFAVPRERVDHLYTFFVQWSPDVYGKDAKEQ----GFVVVEK---------- 762

  Fly  1097 KAGMGGGSQDGEEI-------SDLTRESWELIKAPFAKTYKIIKTASHAASHDLEMLGGEVLSMS 1154
                       ||:       |:.|.:|||:|....||..|  .|.|:....:.|..|       
  Rat   763 -----------EELTMIDNFFSEPTTKSWEIITVEEAKRRK--STCSYYEEEEEEEEG------- 807

  Fly  1155 TDEYRKTSLFATGSFDLDFPIPDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFSTSQHGFAL 1219
                                :|.|...:.:|...|.|:|...||||.:||.|.|.:||.:||.:|
  Rat   808 --------------------LPILQSHSALLENMHIEQLARRLPARVQGYPWRLAYSTLEHGTSL 852

  Fly  1220 NSLYRKMARLESPVLIVIEDTEHNVFGALTSCSLHVSDHFYGTGESLLYKFNPSFKVFHWTGENM 1284
            .:||||.|.|:||||:||:|.::.:|||..:.....|||:|||||:.||.|:|:||||.|:|||.
  Rat   853 KTLYRKSASLDSPVLLVIKDMDNQIFGAYATHPFRFSDHYYGTGETFLYTFSPNFKVFKWSGENS 917

  Fly  1285 YFIKGNMESLSIGAGDGRFGLWLDGDLNQGRSQQCSTYGNEPLAPQEDFVIKTLECWAF 1343
            |||.|::.||.:|.|.||||||||.||..|||..|||:.|:.|:.:|||:::.||.|.|
  Rat   918 YFINGDISSLELGGGGGRFGLWLDADLYHGRSNSCSTFNNDILSKKEDFIVQDLEVWTF 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306 33/99 (33%)
LysM 329..371 CDD:279777 21/41 (51%)
TLDc 1182..1344 CDD:214733 86/162 (53%)
Ncoa7XP_038955206.1 LysM 149..191 CDD:396179 21/41 (51%)
TLDc 815..977 CDD:214733 86/162 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 197 1.000 Domainoid score I3017
eggNOG 1 0.900 - - E1_COG5142
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 402 1.000 Inparanoid score I1861
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384247at33208
OrthoFinder 1 1.000 - - FOG0001020
OrthoInspector 1 1.000 - - otm45838
orthoMCL 1 0.900 - - OOG6_100646
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2069
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.730

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