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Protein Alignment mtd and Tldc2
DIOPT Version :9
| Sequence 1: | NP_001246928.1 |
Gene: | mtd / 45467 |
FlyBaseID: | FBgn0013576 |
Length: | 1344 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_006499899.1 |
Gene: | Tldc2 / 383766 |
MGIID: | 2686178 |
Length: | 261 |
Species: | Mus musculus |
| Alignment Length: | 164 |
Identity: | 79/164 - (48%) |
| Similarity: | 112/164 - (68%) |
Gaps: | 0/164 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1178 LIGKTEILTEEHREKLCSHLPARAEGYSWSLIFSTSQHGFALNSLYRKMARLESPVLIVIEDTEH 1242
::|.:||...:...:|..|||.|..|:.|||:|.||:.||:|..|||:|.....|||:::.|.:.
Mouse 95 VLGASEIKQLQLHLQLSLHLPPRVTGHPWSLVFCTSRDGFSLRRLYRQMEGHSGPVLLLLRDQDG 159
Fly 1243 NVFGALTSCSLHVSDHFYGTGESLLYKFNPSFKVFHWTGENMYFIKGNMESLSIGAGDGRFGLWL 1307
.:|||.:|.::.:|..||||||:.|:.|:|..|||.|||.|.:|:||:::||.:|:|.|:|||||
Mouse 160 QMFGAFSSSAIRLSKGFYGTGETFLFSFSPQLKVFKWTGHNSFFVKGDLDSLMMGSGSGQFGLWL 224
Fly 1308 DGDLNQGRSQQCSTYGNEPLAPQEDFVIKTLECW 1341
||||..|.|..|:|:.||.||.:|.|.||.||.|
Mouse 225 DGDLYHGGSYPCATFNNEVLARREQFCIKELEAW 258
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| mtd | NP_001246928.1 |
LysM |
271..371 |
CDD:224306 |
|
| LysM |
329..371 |
CDD:279777 |
|
| TLDc |
1182..1344 |
CDD:214733 |
78/160 (49%) |
| Tldc2 | XP_006499899.1 |
TLDc |
115..261 |
CDD:214733 |
73/144 (51%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
C167831940 |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5142 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001020 |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100646 |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R882 |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.670 |
|
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