DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtd and Ncoa7

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:XP_011241455.1 Gene:Ncoa7 / 211329 MGIID:2444847 Length:953 Species:Mus musculus


Alignment Length:1236 Identity:341/1236 - (27%)
Similarity:523/1236 - (42%) Gaps:339/1236 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 QNDRQRRRRSSLQTKLDRHRRKKMEYSNQRSLDSGMMCSESHSDLTNDSLAEGSGSFANRSRNGN 222
            :...|:.|:.|...:|   ::||....|                      ||...:.:::||:|.
Mouse     6 EKKEQKERKQSYFARL---KKKKQAKQN----------------------AEIVSAASSKSRSGK 45

  Fly   223 DD-EDDIID------PSHGEYFPREKRHSWWNIFVPDNFKNRSRRASQDVSSLSRSVDNLAIPVR 280
            || ..||::      .:.|::...:|:            |.:|.:..:               :|
Mouse    46 DDANSDILEQDKFNVTAEGDHSTDDKK------------KRKSNQLKE---------------IR 83

  Fly   281 RSKSRSVDHGLAAPFDLDSLRSKVEQRFESVDKLSRQKSSLPTIPTISYTVGNRDTLTSVAARFD 345
            |::       |...:.:|..::|...:.|.  |:..||..    .|:.||.|::|||.|||.:|:
Mouse    84 RTE-------LKRYYSVDDNQNKTHDKKEK--KMMVQKPQ----GTMEYTAGSQDTLNSVALKFN 135

  Fly   346 TTPSELTHLNRLNSSFIYPGQQLLVPDK--SAKDDASSSSTHDADGASLSGKSSPVERKLSGDES 408
            .||::|..||:|.:..|.|||.|.|||.  |:.....||||   .||::|..||..|.    |:.
Mouse   136 VTPNKLVELNKLFTHTIVPGQVLFVPDANISSSTIQLSSST---PGATVSPSSSDAEY----DKL 193

  Fly   409 REKDIL-EGLRPGSPKPGHIERVGGSSQQQQAEEEANKSDDPVITQRFLKINVRHITDGQGVVGG 472
            .:.|:. :.|:|       ||||..|:.::         |:|.:. :|||:|.|:.|||:|||||
Mouse   194 PDADLARKALKP-------IERVLSSTSEE---------DEPGVV-KFLKMNCRYFTDGKGVVGG 241

  Fly   473 VLLVTPNAVMFDPNVSDPLVIEHGPESYGVIAPMELVVNAAIFHDIAHMRVAGGAGQGLNSASGD 537
            |::||||.:||||:.|||||||:|.|.||:|.|||.||:.|::.||:||::              
Mouse   242 VMIVTPNNIMFDPHKSDPLVIENGCEEYGLICPMEEVVSIALYSDISHMKI-------------- 292

  Fly   538 AEKPEIYYPKPVLVEEDSKELPEQQSLLGEDGNKRLDAEIGSLEIADDQESLCSSTGRDGDAFPK 602
                     |..|    ..:||.....|...|               :.|.|.|.  :|.:.|  
Mouse   293 ---------KDAL----PSDLPRDLCPLYRPG---------------EWEDLASE--KDINPF-- 325

  Fly   603 AFDRERVEDSSMEAKDSAKTDALDDEDKKAGLGLSSTRSTLEERRKSLLDHHWAIPSKDRSSEDE 667
                                              |..:|..:|:|:...:...|:.:|...|.:|
Mouse   326 ----------------------------------SKFKSINKEKRQQNGERTLALDAKSVRSPEE 356

  Fly   668 GDNESNVTVDSGARVQDPHSAN-------SSVSGVPLSQPPVAAAAAAAAVAPASAVVPLPPSGI 725
            .      |..:..|::.|.::.       .|..|.....|.|...:..||:.|.:....|.....
Mouse   357 S------TERTCTRIEPPDNSELWKLKNLQSSRGTTSESPSVTQLSMRAALEPTAKENCLLKGDE 415

  Fly   726 DLEHLEQLSKQSCYDSGI------------DIREPVPNVQPIPKKTVYSDADIVLSSDWVPPKTI 778
            |...||:||.|.  :|||            |.::..|:.....||.....|..|:          
Mouse   416 DFVDLEELSSQP--ESGINKGDATKECLSYDQKKDGPHTVMSAKKGHVQSAQEVM---------- 468

  Fly   779 VPTHFSESPPRSTILGQSLDAGTGGAGGVRKKTSSVSFSVDDEAAQQAQAQSAALAVTDKQADK- 842
                   .|...|.|..:||..|.       :....:..||..:........:.|.: .:..|| 
Mouse   469 -------GPESDTELKGALDLETA-------EKQDEAPEVDKHSGSPENLGESTLNI-HEDLDKI 518

  Fly   843 --------KNKMLKRLSYPLTWVEGLTGEGGAVPPGGVG---SGSLNKSGDTDSAPNTGDSNQSV 896
                    |||...:|...:...|  ..:..::.|||:.   |.||.::|  ||.|.......::
Mouse   519 KLIEFYLNKNKEGSQLLENVQKSE--LSDRKSIEPGGIDITLSSSLPQAG--DSPPEDNKEPGTL 579

  Fly   897 FSKVFSSSPITLVSELGGNLFSKTPSEDSGGSPVPPLTPHSTHSEGHMTYGRSSIGTFIRPHSSE 961
            :.|...:.|:.|.......:.:.....||.||.:..:. ||...:     .:|.|..::      
Mouse   580 WVKGGETLPLKLDPSAEETVINNKEVLDSLGSSLDKMC-HSAQMD-----NKSEIQLWL------ 632

  Fly   962 GTSSSTKLKEAKQAPKLDYRSMVSMDDKPELFISVDKLIPRPARACLDPPLYLRLRMGKPIGKAI 1026
                   ||          |..|.::.....|.....::|........||::|.:::|||:.|:.
Mouse   633 -------LK----------RIQVPIEGLRIAFFCDSDILPSKEEKSKTPPMFLCIKVGKPMRKSF 680

  Fly  1027 PLPTSVM--SYGKNKLRAEYWFSVPKNRVDELYRFINTWVKHLYGELDEEQIKARGFELIQEDTE 1089
            ...|:.|  .|.|.:.:.||||:||:.|||.||.|...|...:||:..:||    ||.::::   
Mouse   681 ASHTATMVQQYSKRRKQPEYWFAVPRERVDHLYTFFVQWSPDVYGKDAKEQ----GFVVVEK--- 738

  Fly  1090 WTKSGTTKAGMGGGSQDGEEI-------SDLTRESWELIKAPFAKTYKIIKTASHAASHDLEMLG 1147
                              ||:       |:.|.:|||:|....||..|  .|.|:....:.|..|
Mouse   739 ------------------EELNMIDNFFSEPTTKSWEIITVEEAKRRK--STCSYYEEEEEEEEG 783

  Fly  1148 GEVLSMSTDEYRKTSLFATGSFDLDFPIPDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFST 1212
                                       :|.|...:.:|...|.|:|...||||.:||.|.|.:||
Mouse   784 ---------------------------LPILQPHSALLENMHIEQLARRLPARVQGYPWRLAYST 821

  Fly  1213 SQHGFALNSLYRKMARLESPVLIVIEDTEHNVFGALTSCSLHVSDHFYGTGESLLYKFNPSFKVF 1277
            .:||.:|.:||||.|.|:||||:||:|.::.:|||..:.....|||:|||||:.||.|:|:||||
Mouse   822 LEHGTSLKTLYRKSASLDSPVLLVIKDMDNQIFGAYATHPFKFSDHYYGTGETFLYTFSPNFKVF 886

  Fly  1278 HWTGENMYFIKGNMESLSIGAGDGRFGLWLDGDLNQGRSQQCSTYGNEPLAPQEDFVIKTLECWA 1342
            .|:|||.|||.|::.||.:|.|.||||||||.||..|||..|||:.|:.|:.:|||:::.||.|.
Mouse   887 KWSGENSYFINGDISSLELGGGGGRFGLWLDADLYHGRSNSCSTFNNDILSKKEDFIVQDLEVWT 951

  Fly  1343 F 1343
            |
Mouse   952 F 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306 31/99 (31%)
LysM 329..371 CDD:279777 21/41 (51%)
TLDc 1182..1344 CDD:214733 86/162 (53%)
Ncoa7XP_011241455.1 LysM 119..161 CDD:366664 21/41 (51%)
TLDc 791..953 CDD:214733 86/162 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 188 1.000 Domainoid score I3312
eggNOG 1 0.900 - - E1_COG5142
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 402 1.000 Inparanoid score I1913
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384247at33208
OrthoFinder 1 1.000 - - FOG0001020
OrthoInspector 1 1.000 - - otm43759
orthoMCL 1 0.900 - - OOG6_100646
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R882
SonicParanoid 1 1.000 - - X2069
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.760

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