DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtd and Oxr1

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:XP_017450106.1 Gene:Oxr1 / 117520 RGDID:621857 Length:886 Species:Rattus norvegicus


Alignment Length:1173 Identity:326/1173 - (27%)
Similarity:474/1173 - (40%) Gaps:362/1173 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 HSWWNI------FVPDNFKNRSRRASQDVSS------------------------------LSRS 271
            ||..|:      ||...|..:.:..|.|:::                              .:.|
  Rat     3 HSTMNLPQRIPSFVTHKFGLKKKSQSVDITAPGFNPLGGAGKQAPQASKPPAPKTPIIEEEQNNS 67

  Fly   272 VDNLAIPVRRSKSR---SVDHGLAAPFDLDSLRSKVEQRFESVDKLSRQKSSLPTIPTISYTVGN 333
            .:....|.|:|:.:   ::|.|.....|      |.:.|     ::|.||..    .||.|||.:
  Rat    68 ANTQKHPSRKSELKRFYTIDTGQKKTLD------KKDGR-----RMSFQKPK----GTIEYTVES 117

  Fly   334 RDTLTSVAARFDTTPSELTHLNRLNSSFIYPGQQLLVPDKSAKDDASSSSTHDADGASLSGKS-- 396
            ||:|.|:|.:|||||:||..||:|.|..:..||.|.|||........||       .|||..|  
  Rat   118 RDSLNSIALKFDTTPNELVQLNKLFSRAVVTGQVLYVPDPEYVSSVESS-------PSLSPVSPL 175

  Fly   397 SPVERKLSGDESREKDILEGLRPGSPKPGHIE------RVGGSSQQQQAEEEANKSDDPVITQRF 455
            ||...:...|::...|:   :.|....|...|      ||..|:.:   ||||       .|::|
  Rat   176 SPTSSEAEFDKTTTPDV---VHPKEAPPSSTESSIRPARVVSSTSE---EEEA-------FTEKF 227

  Fly   456 LKINVRHITDGQGVVGGVLLVTPNAVMFDPNVSDPLVIEHGPESYGVIAPMELVVNAAIFHDIAH 520
            ||||.::||:|:|.|.||||||||.:||||:.:||||.|:|.|.||::.|||.|::||::.:|. 
  Rat   228 LKINCKYITNGKGTVSGVLLVTPNNIMFDPHKTDPLVQENGCEEYGIMCPMEEVMSAAMYKEIL- 291

  Fly   521 MRVAGGAGQGLNSASGDAEKPEIYYPKPVLVEEDSKELPEQQSLLGEDGNKRLDAEIGSLEIADD 585
                                             ||| |.|                  ||.|..|
  Rat   292 ---------------------------------DSK-LKE------------------SLPIEVD 304

  Fly   586 QESLCSSTGRDGDAFPKAFDRERVEDSSMEAKDSAKTDALDDEDKKAGLGLSS---TRSTLEERR 647
            |.|     || |....|.......|::...::|.. .|::....:.....||.   |.|.|...|
  Rat   305 QLS-----GR-GFCHSKKMTGVPAEETDSRSRDQG-NDSVSTAPRSTEESLSEDVFTESELSPIR 362

  Fly   648 KSLLDHHWAIPSKDRSSEDEGDNESNVTVDSGARVQDPHSANSSVSGVPLSQPPVAAAAAAAAVA 712
            :.|       ||.:...|...|                 :::.||..|  ||..|.:..||:   
  Rat   363 EEL-------PSSELRQEKSSD-----------------ASSESVQTV--SQIEVESLTAAS--- 398

  Fly   713 PASAVVPLPPSGIDLEHLEQLSKQSCYDSGIDIREPVPNVQPIPKKTVYSDADIVLSSDWVPPKT 777
             .||.||        :|....|.:|..:.|           .:..:|..|..:|.....      
  Rat   399 -ESADVP--------DHTNANSGRSSSEVG-----------ALSHETGLSSLEIATKEG------ 437

  Fly   778 IVPTHFSESPPRSTILGQSLDAGTGG---AGGVRKKTSSV-------SF----SVDDEAAQQAQA 828
                                |..||.   ..|.:::::.:       ||    |:..||.:.:.:
  Rat   438 --------------------DKATGNLQEVSGPKEQSTDIKGQDNQDSFHHENSLQQEAGEDSLS 482

  Fly   829 QSAALAVTDKQA---DKKNKMLKRLSYPLTWVEGLTGEGGAVPPGGVGSGSLNKSGDTDSAPNTG 890
            ....:.:|:|..   |::.|.|||.|.  |.||.|.              .|.|:.....|....
  Rat   483 SGETVELTEKPTVLKDQQGKELKRDSE--TEVEELR--------------KLWKTHSMQQAKQQR 531

  Fly   891 DSNQSVFSKVFSSSPITLVSELGGNLFSKTPSEDSGGSPVPPLTPHSTHSEGHMTYGRSSIGTFI 955
            |:.|.|                     ::..|:..|       .|...|.||             
  Rat   532 DTIQQV---------------------AQRESKHRG-------APADAHGEG------------- 555

  Fly   956 RPHSSEGTSSSTKLKEAKQAPKLDYRSMVSMDDKPELFISVDKLIPRPARACLDPPLYLRLRMGK 1020
                      |:.||| |:..:|.                                .:|.||:||
  Rat   556 ----------SSLLKE-KRRHRLH--------------------------------KFLCLRVGK 577

  Fly  1021 PIGKAIPLPTS--VMSYGKNKLRAEYWFSVPKNRVDELYRFINTWVKHLYGELDEEQIKARGFEL 1083
            |:.|......|  :..|.:...:.||||:||:.|.|.||.|...|...:|.|...|..:..||.:
  Rat   578 PMRKTFVSQASATMQQYAQRDKKHEYWFAVPQERTDHLYAFFIQWSPEIYAEDTGEYTREPGFIV 642

  Fly  1084 IQEDTEWTKSGTTKAGMGGGSQDGEEISDLTRESWELIKAPFAKTYKIIKTASHAASHDLEMLGG 1148
            :::..|   ||..:|..|          :.....||::..  |:.::.|...:   :.:|..|..
  Rat   643 VKKMAE---SGPDEAPAG----------EAAAREWEVVSV--AEYHRRIDALN---TEELRTLCR 689

  Fly  1149 EVLSMSTDEYRKTSLFATGSFDLDFP---IPDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIF 1210
            . |.::|.|...:...|....||: |   .|:|...:|:|..:..|||..|||.|..||.|:|::
  Rat   690 R-LQITTREDINSKQAAPAKADLE-PESFRPNLSDPSELLLPDQIEKLTKHLPPRTIGYPWTLVY 752

  Fly  1211 STSQHGFALNSLYRKMARLESPVLIVIEDTEHNVFGALTSCSLHVSDHFYGTGESLLYKFNPSFK 1275
            .|.:||.:|.:|||.|..|::|||:||:|::..|||||.|....|||.||||||:.::.|.|.|:
  Rat   753 GTGKHGTSLKTLYRTMTGLDTPVLMVIKDSDGQVFGALASEPFKVSDGFYGTGETFVFTFCPEFE 817

  Fly  1276 VFHWTGENMYFIKGNMESLSIGAGDGRFGLWLDGDLNQGRSQQCSTYGNEPLAPQEDFVIKTLEC 1340
            ||.|||:||:||||:|:||:.|.|.|.|.|||||||..|||..|.|:||..|:.:|||.|:.:|.
  Rat   818 VFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKKEDFFIQDIEI 882

  Fly  1341 WAF 1343
            |||
  Rat   883 WAF 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306 36/102 (35%)
LysM 329..371 CDD:279777 22/41 (54%)
TLDc 1182..1344 CDD:214733 87/162 (54%)
Oxr1XP_017450106.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 168 1.000 Domainoid score I3722
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 402 1.000 Inparanoid score I1861
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384247at33208
OrthoFinder 1 1.000 - - FOG0001020
OrthoInspector 1 1.000 - - otm45838
orthoMCL 1 0.900 - - OOG6_100646
Panther 1 1.100 - - LDO PTHR23354
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2069
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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