DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtd and tldc2

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:XP_031750560.1 Gene:tldc2 / 100493022 XenbaseID:XB-GENE-996510 Length:222 Species:Xenopus tropicalis


Alignment Length:169 Identity:81/169 - (47%)
Similarity:117/169 - (69%) Gaps:1/169 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly  1176 PDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFSTSQHGFALNSLYRKMARLESPVLIVIEDT 1240
            |.|||.::|...:..::||.|||.|..|:||.|::||.:.||:|.::||.|..:.||||::::|.
 Frog    53 PVLIGISQIFGADSIKQLCQHLPPRVLGHSWKLLYSTDKDGFSLRTMYRTMNNVSSPVLLIVKDN 117

  Fly  1241 EHNVFGALTSCSLHVSDHFYGTGESLLYKFNPSFKVFHWTGENMYFIKGNMESLSIGAG-DGRFG 1304
            |..||||.::..||:|:.||||||:.|:.|.|..|||.|||:|.:|::|:.::::.|.| .|..|
 Frog   118 EGRVFGAYSTIELHISNTFYGTGETFLFSFTPELKVFRWTGDNSFFVRGDADAITFGGGKTGSIG 182

  Fly  1305 LWLDGDLNQGRSQQCSTYGNEPLAPQEDFVIKTLECWAF 1343
            |||||||..||||:|.|:.|:.|:..|.|.|..||.|||
 Frog   183 LWLDGDLYHGRSQRCETFNNQILSSHEQFYIHGLEVWAF 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306
LysM 329..371 CDD:279777
TLDc 1182..1344 CDD:214733 77/163 (47%)
tldc2XP_031750560.1 TLDc 59..221 CDD:214733 75/161 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 169 1.000 Domainoid score I3753
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384247at33208
OrthoFinder 1 1.000 - - FOG0001020
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R882
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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