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Protein Alignment mtd and tldc2
DIOPT Version :9
Sequence 1: | NP_001246928.1 |
Gene: | mtd / 45467 |
FlyBaseID: | FBgn0013576 |
Length: | 1344 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_031750560.1 |
Gene: | tldc2 / 100493022 |
XenbaseID: | XB-GENE-996510 |
Length: | 222 |
Species: | Xenopus tropicalis |
Alignment Length: | 169 |
Identity: | 81/169 - (47%) |
Similarity: | 117/169 - (69%) |
Gaps: | 1/169 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1176 PDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFSTSQHGFALNSLYRKMARLESPVLIVIEDT 1240
|.|||.::|...:..::||.|||.|..|:||.|::||.:.||:|.::||.|..:.||||::::|.
Frog 53 PVLIGISQIFGADSIKQLCQHLPPRVLGHSWKLLYSTDKDGFSLRTMYRTMNNVSSPVLLIVKDN 117
Fly 1241 EHNVFGALTSCSLHVSDHFYGTGESLLYKFNPSFKVFHWTGENMYFIKGNMESLSIGAG-DGRFG 1304
|..||||.::..||:|:.||||||:.|:.|.|..|||.|||:|.:|::|:.::::.|.| .|..|
Frog 118 EGRVFGAYSTIELHISNTFYGTGETFLFSFTPELKVFRWTGDNSFFVRGDADAITFGGGKTGSIG 182
Fly 1305 LWLDGDLNQGRSQQCSTYGNEPLAPQEDFVIKTLECWAF 1343
|||||||..||||:|.|:.|:.|:..|.|.|..||.|||
Frog 183 LWLDGDLYHGRSQRCETFNNQILSSHEQFYIHGLEVWAF 221
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
mtd | NP_001246928.1 |
LysM |
271..371 |
CDD:224306 |
|
LysM |
329..371 |
CDD:279777 |
|
TLDc |
1182..1344 |
CDD:214733 |
77/163 (47%) |
tldc2 | XP_031750560.1 |
TLDc |
59..221 |
CDD:214733 |
75/161 (47%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
169 |
1.000 |
Domainoid score |
I3753 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D384247at33208 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001020 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R882 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.950 |
|
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