DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtd and ncoa7

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:XP_031757856.1 Gene:ncoa7 / 100487448 XenbaseID:XB-GENE-6048551 Length:911 Species:Xenopus tropicalis


Alignment Length:1097 Identity:307/1097 - (27%)
Similarity:472/1097 - (43%) Gaps:336/1097 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 QRFESVDKLSRQKSSLPTIPTISYTVGNRDTLTSVAARFDTTPSELTHLNRLNSSFIYPGQQLLV 370
            |..::|.|..:..:..| :.||.||....|||.|:|.:|:.||::|..||:|.:..|.|||.|.|
 Frog    91 QNNKNVKKEKKMVTRRP-LGTIEYTATGTDTLNSIALKFNLTPNKLVELNKLFTHTIVPGQILYV 154

  Fly   371 PDKSAKDDASSSSTHDADGASLSGKSSPVERKLSGDESREKDILEGLRPGSPKPGHIERVGGSSQ 435
            ||.|.   ||.:....|:...|   :||:......|:..:.|:   .|..| ||  ||||..|:.
 Frog   155 PDSSV---ASIARDPKANAGIL---ASPLSSDAEYDKLPDADL---ARKAS-KP--IERVLSSTS 207

  Fly   436 QQQAEEEANKSDDPVITQRFLKINVRHITDGQGVVGGVLLVTPNAVMFDPNVSDPLVIEHGPESY 500
            ::  ||.|:        .:|:|:|.|:||||:||||||::||||.|||||:.|||||||:|.|.|
 Frog   208 EE--EEPAD--------VKFIKMNCRYITDGKGVVGGVMIVTPNNVMFDPHKSDPLVIENGCEEY 262

  Fly   501 GVIAPMELVVNAAIFHDIAHMRVAGGAGQGLNSASGDAEKP--EIYYP---KPVLVEED------ 554
            |:|.|||.||:.|:::||:||::.       ::...|..|.  .:|.|   :.:..|:|      
 Frog   263 GLICPMEEVVSVALYNDISHMKIK-------DALPSDIPKDLCPLYRPGEWEDLSSEKDINPFSK 320

  Fly   555 ----SKELPEQQSLLGED--GNKRLDAEIGSLEIADDQESLCSSTGRDGDAFPKAF---DRERVE 610
                |||..:|..:.|:.  .||.:......|::......|....|.||...|...   :|..::
 Frog   321 FKNLSKEKRQQNGVSGQSIAENKLITTSSKDLDLIKITTELEPKNGSDGQLSPVQLTVDERLAIQ 385

  Fly   611 -DSSMEAKDSAKTDALDD---EDKKAGLGLSSTRSTLEERRK---------SLLDHHWAIPSKDR 662
             |.|:|...|::|...|:   ||....|..::..:..:...|         ..::|     |..:
 Frog   386 TDQSIENITSSRTKKADNSPVEDDFIELVATTAEANCKNNYKESENPTVVGEAIEH-----SMFQ 445

  Fly   663 SSEDEGDNESNVTVDSGARVQDPHSANSSVSGVPLSQPPVAAAAAAAAVAPASAVVPLPPSGIDL 727
            :.....::|||.|||                                .:.|              
 Frog   446 NDIPCNNSESNRTVD--------------------------------VICP-------------- 464

  Fly   728 EHLEQLSKQSCYDSGIDIREPVPNVQPIPKKT-VYSDADIVLSSDWVPPKTIVPTHFSESPPRST 791
              :||:|            :||..:..:..|| ..||:|.:                        
 Frog   465 --VEQIS------------DPVKRICLVSDKTETTSDSDFI------------------------ 491

  Fly   792 ILGQSLDAGTGGAGGVRKKTSSVSFSVDDEAAQQAQAQSAALAVTDKQADKKNKMLKRLSYPLTW 856
               |:|.                            |:::..|.::..:   |||:          
 Frog   492 ---QTLQ----------------------------QSKNIELCLSPAE---KNKL---------- 512

  Fly   857 VEGLTGEGGAVPPGGVGSGSLNKSGDTDSAPNTGDSNQSVFSKVFSS--------SPITLVSELG 913
                       ...|.....|:.|||.              .||.|.        :.:|.|::..
 Frog   513 -----------DICGFQRSDLDNSGDE--------------GKVMSCINLEPKNITEVTTVTQNV 552

  Fly   914 GNLFSKTPSEDSGGSPVPPLTPHSTHSEGHMTYGRSSIGTFIRPHSSEGTSSSTKLKEAKQAPKL 978
            .|..|| |.|.:....|..|:|.|                                      |::
 Frog   553 ENKLSK-PEEKASEESVDSLSPSS--------------------------------------PEV 578

  Fly   979 DYRSMVSMDDKPELFISVDKLIPRPARACLD--------PPLYLRLRMGKPIGKAIPLPTS--VM 1033
            ..:....||.:.||.:.:.|.:.||......        ||::|.:|:|||:.|:....::  |.
 Frog   579 PSQKETLMDSESELKLWLIKRMQRPIEDLFPSKEEKSKIPPMFLCIRVGKPMRKSFASQSTAVVQ 643

  Fly  1034 SYGKNKLRAEYWFSVPKNRVDELYRFINTWVKHLYGELDEEQIKARGFELIQEDTEWTKSGTTKA 1098
            .|.:.:.:.||||:||:.|||.||.|...|...:||:..:||    ||.::::|           
 Frog   644 QYIRRRKQPEYWFAVPQERVDHLYNFFVQWSPEVYGKDAKEQ----GFVVVEKD----------- 693

  Fly  1099 GMGGGSQDGEEI-------SDLTRESWELIKAPFAKTYKIIKTASHAASHDLEMLGGEVLSMSTD 1156
                      |:       |:.:.:|||:|....||..|     |..:.:|            .|
 Frog   694 ----------ELNMIDNFFSEPSTKSWEIITVEEAKRRK-----STCSCYD------------DD 731

  Fly  1157 EYRKTSLFATGSFDLDFPIPDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFSTSQHGFALNS 1221
            |..:.:|       .|| :|||..|:.:|.:...|||..:||||.:||.|.|::||.:||.:|.:
 Frog   732 EDEEETL-------EDF-LPDLKQKSVLLDDMQVEKLAHNLPARVQGYLWHLVYSTQEHGTSLKT 788

  Fly  1222 LYRKMARLESPVLIVIEDTEHNVFGALTSCSLHVSDHFYGTGESLLYKFNPSFKVFHWTGENMYF 1286
            |||.:|.::||||:|::|.::.||||..:....:|||:|||||:.||.|.|.|||:.|:|||.||
 Frog   789 LYRNLATVDSPVLLVVKDMDNQVFGAYATHPFRLSDHYYGTGETFLYTFCPDFKVYKWSGENSYF 853

  Fly  1287 IKGNMESLSIGAGDGRFGLWLDGDLNQGRSQQCSTYGNEPLAPQEDFVIKTLECWAF 1343
            |.|::..|.:|.|.||||||||.||..|||..|.|:.|:.::.:|||:::.:|.|||
 Frog   854 INGDISFLGLGGGGGRFGLWLDSDLYHGRSNACCTFNNDTMSKKEDFIVQDIEVWAF 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306 25/64 (39%)
LysM 329..371 CDD:279777 19/41 (46%)
TLDc 1182..1344 CDD:214733 80/162 (49%)
ncoa7XP_031757856.1 LysM 119..155 CDD:396179 17/35 (49%)
TLDc 751..911 CDD:214733 80/160 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 189 1.000 Domainoid score I3227
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 389 1.000 Inparanoid score I1958
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384247at33208
OrthoFinder 1 1.000 - - FOG0001020
OrthoInspector 1 1.000 - - otm48930
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2069
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.970

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