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Protein Alignment mtd and ndufaf4
DIOPT Version :9
Sequence 1: | NP_001246928.1 |
Gene: | mtd / 45467 |
FlyBaseID: | FBgn0013576 |
Length: | 1344 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001135673.1 |
Gene: | ndufaf4 / 100216234 |
XenbaseID: | XB-GENE-5852768 |
Length: | 177 |
Species: | Xenopus tropicalis |
Alignment Length: | 131 |
Identity: | 31/131 - (23%) |
Similarity: | 51/131 - (38%) |
Gaps: | 25/131 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 264 DVSSLSRSVDNLAIPVRRSKSRSVDHGLAAPFDLDS-LRSKVE---QRFESVDKLSRQKSSLPTI 324
|:....|:.|||.: .|.|...|| .:|..| :::||. |:...:.|.:..:.||..:
Frog 49 DIEDKIRNKDNLLL--TRLKEVYVD-----SYDPSSGVQTKVSRSAQKEHRLPKFAMNRESLMGV 106
Fly 325 PTISYTVGNRDTLTSVAA--RFDTTP--------SELTHLNRLNS----SFIYPGQQLLVPDKSA 375
...|...||...|.::.. ....:| ||..||:..|: .:..|....::|.|..
Frog 107 DVESIPKGNISVLEALTLLNNHKNSPETWTAEKISEDYHLDLKNTQSLLEYFIPFNVKIIPPKDK 171
Fly 376 K 376
|
Frog 172 K 172
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
mtd | NP_001246928.1 |
LysM |
271..371 |
CDD:224306 |
26/117 (22%) |
LysM |
329..371 |
CDD:279777 |
10/55 (18%) |
TLDc |
1182..1344 |
CDD:214733 |
|
ndufaf4 | NP_001135673.1 |
UPF0240 |
2..169 |
CDD:369079 |
29/126 (23%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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