DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtd and oxr1

DIOPT Version :9

Sequence 1:NP_001246928.1 Gene:mtd / 45467 FlyBaseID:FBgn0013576 Length:1344 Species:Drosophila melanogaster
Sequence 2:NP_001106462.1 Gene:oxr1 / 100127645 XenbaseID:XB-GENE-980206 Length:785 Species:Xenopus tropicalis


Alignment Length:1052 Identity:291/1052 - (27%)
Similarity:435/1052 - (41%) Gaps:310/1052 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 TISYTVGNRDTLTSVAARFDTTPSELTHLNRLNSSFIYPGQQLLVPDKSAKDDASS--SSTHDAD 388
            |:.|||..||:|.|:|.:|||||:||..||:|.|..:.|||.|.|||   .|..||  ||...:.
 Frog     9 TMEYTVETRDSLNSIALKFDTTPNELVQLNKLFSRAVVPGQLLYVPD---PDYISSVESSPSLSP 70

  Fly   389 GASLSGKSSPVERKLSGDESR--EKDILEGLRPGSPKPGHIERVGGSSQQQQAEEEANKSDDPVI 451
            .:.||..||..|.:.|.|..|  .|:|.......:.:|..:  |..:|::::|           .
 Frog    71 ISPLSPTSSEAEFEKSTDTERMPYKEITSSPAYSAIRPSRV--VSSTSEEEEA-----------F 122

  Fly   452 TQRFLKINVRHITDGQGVVGGVLLVTPNAVMFDPNVSDPLVIEHGPESYGVIAPMELVVNAAIFH 516
            |::|||||.::||||:|.|.||||||||.:||||:.:|.||.|.|.|.||::.|||.|.:||::.
 Frog   123 TEKFLKINCKYITDGKGTVNGVLLVTPNNIMFDPHKNDLLVQEKGCEEYGIMCPMEEVTSAAMYK 187

  Fly   517 DIAHMRVAGGAGQGLNSASGDAEKPEIYYPKPVLVEEDSKELPEQQSLLGEDGNKRLDAEIGSLE 581
            :|.:.::                             :||                 :..::|.|.
 Frog   188 EIVNSKL-----------------------------KDS-----------------VSVDVGQLS 206

  Fly   582 IADDQESLCSSTGRDGDAFPKAFDRERVEDSSMEAKDSAKTDALDDEDKKAGLGLSSTRSTLEER 646
            .   ....|              ..:::...::...||...||.:|....|      .|||.|..
 Frog   207 C---MREFC--------------HLKKISPGNLHDIDSQMWDAGNDSASTA------PRSTEESL 248

  Fly   647 RKSLLDHHWAIPSKDR--SSEDEGDNESNVTVDSGARVQDPHSANSSVSGVPLSQPPVAAAAAAA 709
            .:.:.......|.::.  ||::...::|     |||..:...:.|.:::...|:   ::...:|:
 Frog   249 SEDVFTESELSPIREEHLSSDELRQDKS-----SGASSESVQTINQNITECSLN---ISDCVSAS 305

  Fly   710 AVAPASAVVPLPPSGIDLEHLEQLSKQSCYDSGIDIREPVPNVQPIPKKTVYSDADIVLSSDWVP 774
            .....|    |.|||              .||||     |.::..:.|    |:|.|.....   
 Frog   306 DDVKDS----LEPSG--------------NDSGI-----VASINDLEK----SEASINAGEG--- 340

  Fly   775 PKTIVPTHFSESPPRSTILGQSLDAGTGGAGGVRKKTSSVSFSVDDEAAQQAQAQSAALAVTDKQ 839
                |....|||   |.||.:::: |.....|:      :|.:.|.:...|..::.||.....:.
 Frog   341 ----VDKDISES---SLILTEAIE-GHNSNDGI------LSSNKDKQTGDQNHSREAAFVRNHQH 391

  Fly   840 ADKKNKMLKRLSYPLTWVEGLTGEGGAVPPGGVGSGSLNKSGDTDSAPNTGDSNQSV--FSKVFS 902
            ...:.:.:|:                                      :.|||....  ..|.:.
 Frog   392 ETVQEEAVKQ--------------------------------------SFGDSETEAEELRKFWK 418

  Fly   903 SSPITLVSELGGNLFSKTPSEDSGGSPVPPLTPHSTHSEGHMTYGRSSIGTFIRPHSSEGTSSST 967
            ...:....:...::...|..|..|..|..     .||.||..    ||:....|.|.|.      
 Frog   419 DLTMQQAKQQREDMQHTTQKEIMGKMPTA-----ETHIEGVC----SSVAKEKRRHRSH------ 468

  Fly   968 KLKEAKQAPKLDYRSMVSMDDKPELFISVDKLIPRPARACLDPPLYLRLRMGKPIGKAI--PLPT 1030
                                                        .||.||:|||:.|..  ....
 Frog   469 --------------------------------------------RYLCLRVGKPMRKTFVSQASA 489

  Fly  1031 SVMSYG-KNKLRAEYWFSVPKNRVDELYRFINTWVKHLYGELDEEQIKARGFELIQ--EDTEWTK 1092
            |:..|. ::||  ||||:||..|.|.||.|...|...||.|...|..:..||.:::  |:||.:.
 Frog   490 SMQQYAQRDKL--EYWFAVPHERSDHLYSFFIQWSPELYAEEVRESAREPGFVVVKKNEETEGSD 552

  Fly  1093 SGTTKAGMGGGSQDGEEISDLTRESWELIKAPFAKTYKIIKTASHAASHDLEMLGGEVLSMSTDE 1157
            ..|               :|.....||::              |.|..|      ..:.:::|:|
 Frog   553 CST---------------NDSAARLWEVV--------------SVAEYH------RRIDALNTEE 582

  Fly  1158 YRK-------------TSLFATG--------SFDLDFPIPDLIGKTEILTEEHREKLCSHLPARA 1201
            .|.             .|..||.        ||.     |:|...:.:|..:..|||..|||.|.
 Frog   583 LRTLCRRLKITTREDVNSKQATNIKNDQEPESFR-----PNLSDPSSLLQTDQIEKLTKHLPPRT 642

  Fly  1202 EGYSWSLIFSTSQHGFALNSLYRKMARLESPVLIVIEDTEHNVFGALTSCSLHVSDHFYGTGESL 1266
            .||.|:|::||::||.:|.:|||.|..|::|||:||:|::..:||||.|....:||.||||||:.
 Frog   643 IGYPWTLVYSTAKHGMSLKTLYRTMLGLDTPVLLVIKDSDAQIFGALASEPFKISDCFYGTGETF 707

  Fly  1267 LYKFNPSFKVFHWTGENMYFIKGNMESLSIGAGDGRFGLWLDGDLNQGRSQQCSTYGNEPLAPQE 1331
            |:.|.|.|:||.|||:||:||||:|:||:.|.|.|.|.|||||||..|||..|.|:||..|:.:|
 Frog   708 LFTFCPDFEVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHTCKTFGNCILSKKE 772

  Fly  1332 DFVIKTLECWAF 1343
            ||:::.:|.|||
 Frog   773 DFIVQDIEIWAF 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtdNP_001246928.1 LysM 271..371 CDD:224306 24/44 (55%)
LysM 329..371 CDD:279777 23/41 (56%)
TLDc 1182..1344 CDD:214733 85/162 (52%)
oxr1NP_001106462.1 LysM 12..54 CDD:307567 23/41 (56%)
RIBIOP_C <260..>420 CDD:331620 43/249 (17%)
TLDc 623..785 CDD:214733 85/162 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 189 1.000 Domainoid score I3227
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 389 1.000 Inparanoid score I1958
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384247at33208
OrthoFinder 1 1.000 - - FOG0001020
OrthoInspector 1 1.000 - - otm48930
Panther 1 1.100 - - LDO PTHR23354
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R882
SonicParanoid 1 1.000 - - X2069
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.100

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